Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05751 ATGGAACACAGAACGCTGGAACTCAACCTCGGATCGGCGAAGGATATCAAAGACGTGAATCTCTTTTCCAAGATGGACGTGTACGCCGTCGTTTCGCTCTCAGGCGTCAAAAAGATCAAGACTCCCGTCGACAGAAACGGCGGCACCAACCCCACGTGGAAAGTTACCGAGAAGTTCACCATCGACGAATCGCTCGCGCGTCAGAACGGCTTGACCCTCGAAATCAAGCTCCGCTGCGAGCGCAGCCTCTCCGCCGACAAAGAAATCGGCCAGGTCGTCGTCCCCATAAGGGAGCTCCTCGACCAACCCGGCGACGGAAAATCCTTCCAGCATGTCAGTTACCAGGTCAGAAAACCCTCCGGCAAACCCAAAGGAGCGTTTAGTTTTTCTTACAGATTTAGCGAAAAATTCACAGCGCCCGGGATAGCGCCAGCGCCGTCCGCGCCTGTTGCTCCCAAGACGGAGCCGGTGACGGCTTATCCTGCTCCCGCGGTGGGGTCCACTTCTGCCTCGTATCCCGGCGTGTATCCTCCTCCACCGCAGCCACAATATGCGGGCGGATACGGGTACCCTCCGCCGCCGCAAGCGGCGTACGGGTACGCTCCACAAGCGGCTTACGGGTACGCGGCACAACCCGGGTACGGTTACCCTCCTGCTCCTGCTCCTGCTCAGAGACCCGGGAAGAACAAATTTGGGATGGGATTGGGAGCGGGTTTGCTTGGTGGAGCATTGGGTGGGCTTCTGATCGGAGACATGATATCTGATGTAGGTTCTTACGATGCTGGCTATGACGCTGGTTTTGGAGATGCTGGTGGATTTGATTTTTAA 828 0.57 MEHRTLELNLGSAKDIKDVNLFSKMDVYAVVSLSGVKKIKTPVDRNGGTNPTWKVTEKFTIDESLARQNGLTLEIKLRCERSLSADKEIGQVVVPIRELLDQPGDGKSFQHVSYQVRKPSGKPKGAFSFSYRFSEKFTAPGIAPAPSAPVAPKTEPVTAYPAPAVGSTSASYPGVYPPPPQPQYAGGYGYPPPPQAAYGYAPQAAYGYAAQPGYGYPPAPAPAQRPGKNKFGMGLGAGLLGGALGGLLIGDMISDVGSYDAGYDAGFGDAGGFDF 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05751 275 SMART C2_3c 5 108 IPR000008 -
Viun3g05751 275 CDD C2_SRC2_like 5 129 IPR044750 GO:0006952
Viun3g05751 275 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 134 IPR035892 -
Viun3g05751 275 Gene3D C2 domain 3 135 IPR035892 -
Viun3g05751 275 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
Viun3g05751 275 PANTHER INGRESSION PROTEIN FIC1 1 251 - -
Viun3g05751 275 Pfam C2 domain 5 106 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05751 Viun-Chr3 62893217 62894392 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05751 - - gmx:100784458 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05751 3 62893217 62894392 Viun3g05751 3 62893217 62894392 ECH
Viun3g05751 3 62893217 62894392 Viun9g00190 9 1147883 1149228 PCT