Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00184 ATGGATGCAAAACCTCCTCAACTTGCTGCACAACCTTTCAACTATCAGACATGGTTCTTGAAAGTTTCAATCCACTGTGAAGGTTGCAGGAGGAAAGTGAAGAAAGTTCTGAAGAGCATTGATGGTGTTTTCACTGCAACAATAGACCCACAGCAGAACAAAGTAACAGTCACTGGAAGTGTTGCTGTTGAGACCCTTCTCAGGAAGCTCGTCAGAGCCGGAAAACAAGCCGAGATTTGGCCGGAGAATGACGGAAAAATCTCCGGCAATGGGCAGCAGCAGCAGCAGCAGAAGAAGAAGAATGAAGCAAGAGAACTACAGAGGGTGGAAAATTACAAGGGAACTAAAAATGCTTCTGCCAAGTTTAACAGTGAGAAAAAAAACAGCAGCAATAACTCGCCGGGAAAGTCCCCCTCCGGTGACCAGAGGCCGTCGGAGGGTGGTCGGAGGGAAGGTGGTGGTGGCTCTGCTATGAAGAAGAAGAAGAAAAAATTGCAGAGTGGTGGTGGGAATGCAAACATTGGTTTGAGTTCGGTGGAAGCAGCAGCAAGTACCGGTGCACCTGCACACACTGGATTGCAGTTTCAGGATCTGGGCCCAGTGAATGTGAACCCTACACGTCAGTATTTGCTATTGTATCCTTCTTACTACGTTCCATCTTCACCCTACACGTGTGCTGGTGTTGACCAAGATTGGCATCACTTCCAATCACCACCGTTGGTTTCCTTTGAGATATTCAGTGATGAAAACGTTAATGGGTGTTCTGTTATATGA 774 0.4703 MDAKPPQLAAQPFNYQTWFLKVSIHCEGCRRKVKKVLKSIDGVFTATIDPQQNKVTVTGSVAVETLLRKLVRAGKQAEIWPENDGKISGNGQQQQQQKKKNEARELQRVENYKGTKNASAKFNSEKKNSSNNSPGKSPSGDQRPSEGGRREGGGGSAMKKKKKKLQSGGGNANIGLSSVEAAASTGAPAHTGLQFQDLGPVNVNPTRQYLLLYPSYYVPSSPYTCAGVDQDWHHFQSPPLVSFEIFSDENVNGCSVI 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00184 257 CDD HMA 20 78 IPR006121 GO:0046872
Viun9g00184 257 MobiDBLite consensus disorder prediction 81 171 - -
Viun9g00184 257 MobiDBLite consensus disorder prediction 112 140 - -
Viun9g00184 257 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 8 256 - -
Viun9g00184 257 Pfam Heavy-metal-associated domain 22 73 IPR006121 GO:0046872
Viun9g00184 257 Gene3D - 14 79 - -
Viun9g00184 257 Coils Coil 92 112 - -
Viun9g00184 257 SUPERFAMILY HMA, heavy metal-associated domain 14 81 IPR036163 GO:0046872
Viun9g00184 257 ProSiteProfiles Heavy-metal-associated domain profile. 15 78 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00184 Viun-Chr9 1107694 1109172 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00184 - - vra:106761779 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00184 9 1107694 1109172 Viun9g00184 9 1107694 1109172 ECH
Viun3g05744 3 62849071 62850661 Viun9g00184 9 1107694 1109172 PCT