Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05744 ATGGATGCAAAGTCCTCCCAAGTTCTTCTTCCCTCAGAGCCATTGATGTATCAGACATGGTTCTTGAAAGTTTCCATCCACTGTGAAGGTTGCAGGAGGAAAGTCAAGAAGGTCTTACAGAGCATTGATGGTGTTTTCACCACAACGGTTGACCCGCAGCAGCAGAAAGTGACGGTCACCGGAAGCGTCGGCGTTGAGACGCTGATAAGGAAGCTGGAGAAAGCCGGGAAGCACGCTGAGATTTGGCCGGAGAATCTTGCCGCGGGGAAGGGAAATAACTCCGGCAAAGACAAGCAACAGCAGCAGCAGAAGAAAAAGAAGAAAAACGAACAAGGAGAAGAATCCGAAACCAAGAATAATCACTTGACTACAACGAATGCAGTGGCTACCAATACCACCGCCAACACCAGCAAGAAAAAGGTGAACGAAAAAAGCTCCGGAGAGAAAGGCAACAACGCCGAAAGCAAGAGCGGCGGCGGAGAAAATAAGTCACCGGAAGCGGAGAACAAGGGTGGTCAAAGTGAAGGAGGTGGGAAGAAAAAGAAAAAGAAAGAGACGGAGAAAAGTGAGGGTGATGGAAGTCCAGCATGTAACGGTGGAGGTGCGCACAGTGGATCCCCTGGGCAGGTGAATCTGAGCCCTACACGTCAGCAATCATACCTGTATCCAGAAACATACTGTTATCCCCCACTTTTGTATCTGGCAACTCACAACAGGTTATGTCCCATGGGAACAATGGGTGGTCCTTCCTACTATGTTTCTCCATTGCCCTACATGTGTGCAGGATTGGATCACGACCCTTATCGCCTTCATCAATCCACGCCGTTGGTTCCCTTCGAGATCTTCAGCGACGAGAATGCCAATGGCTGTTCTATCATGTGA 882 0.4943 MDAKSSQVLLPSEPLMYQTWFLKVSIHCEGCRRKVKKVLQSIDGVFTTTVDPQQQKVTVTGSVGVETLIRKLEKAGKHAEIWPENLAAGKGNNSGKDKQQQQQKKKKKNEQGEESETKNNHLTTTNAVATNTTANTSKKKVNEKSSGEKGNNAESKSGGGENKSPEAENKGGQSEGGGKKKKKKETEKSEGDGSPACNGGGAHSGSPGQVNLSPTRQQSYLYPETYCYPPLLYLATHNRLCPMGTMGGPSYYVSPLPYMCAGLDHDPYRLHQSTPLVPFEIFSDENANGCSIM 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05744 293 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 13 293 - -
Viun3g05744 293 CDD HMA 22 80 IPR006121 GO:0046872
Viun3g05744 293 Pfam Heavy-metal-associated domain 24 78 IPR006121 GO:0046872
Viun3g05744 293 MobiDBLite consensus disorder prediction 80 214 - -
Viun3g05744 293 MobiDBLite consensus disorder prediction 173 191 - -
Viun3g05744 293 Gene3D - 17 81 - -
Viun3g05744 293 Coils Coil 98 118 - -
Viun3g05744 293 MobiDBLite consensus disorder prediction 118 140 - -
Viun3g05744 293 ProSiteProfiles Heavy-metal-associated domain profile. 17 80 IPR006121 GO:0046872
Viun3g05744 293 MobiDBLite consensus disorder prediction 99 117 - -
Viun3g05744 293 SUPERFAMILY HMA, heavy metal-associated domain 14 83 IPR036163 GO:0046872
Viun3g05744 293 FunFam Copper transport protein ATOX1 16 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05744 Viun-Chr3 62849071 62850661 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05744 - - gmx:100808829 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05744 3 62849071 62850661 Viun9g00184 9 1107694 1109172 PCT