Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00171 ATGGGTGCGATGACCACCAACCGCAAGCGTACCGAAGAATGCATGAACGTGAACCTCACCAATTCAGATTCCTCCCGTAAACGCTCCAAATTATCTACCAAACCCGCTCCTTCCGCCACCAGTGCCGTCGCGCGACTCTCCCGGTATCCGCAGGTTTCCGCGCCGTTGGCGAGGGAGGTTCACGCGCCGTGTCGGCCGACAAAATTTCCACTCGCTGCTAGGGTTAGCATTCGCGTCGGCGATGCCATGGGGAACGCTCTGATCACTAAGTTCGAGAAGGCGAAGCGTTCGACGTTGGAGAAGTGTAGGTCTGTAGTGGAGAAGGGGAAGGAGGTGATTGTAGTGGACGCGGAGAGTGATGAGCCTTGTGCGGATTCGAGTGTGGAAGAGCCGCATGGTGACGGTGACAAGTTTAGGGTTCAGCAGCAGTCGCAGTCGACGTTATCATTTGATTCGGAGCTGAGGAATGCGGAATTGAAGGTAGCGAGTAGAGGGAAGTTGTGGGGTTCTGAGACGCAGCTTGATGTTGAAAGTGTTCATGCGTATAAGAAGTTGCTTGAGGATGTTGGGAGGAGAAATGGCACATTTCAGAGGCTGAATTTTGAGATTGACCTGAATGAGAAGCGCAGGGACCATTTTAATTTGTTGAGACCGAAGAAGGAATTGGATGAGGAATCAGAAGCGCTGCAAGAACCATTTGTTGCTCTTAGTAGTGAGGAAGAAGATGAGGTTGAGCGTGCCTTCTCTGCCAACCGTTGGACAATCTTGGTTACCCATGAGCATTCTAATATCGAGATTACTGGAGAAAAGTTTCAATGCCTTAGGTCAACTGGATGGTTAAATGATGAGGTGATAAATTTGTATTTAGCTTTGCTGAAGGAGAGGGAACAAAGACAGTCACATAAATTTCTGAAATGTCATTTTTTCAATACCTTTTTCTACAAAAGGTTAATAAGTGGCCCAAATGGTTATGATTTCAAATCTGTCAGAAGATGGACAAGCCAACGGAAATTGGGATACAGTTTACTTGAATGTGATAAAATATTTGTACCTATCCATCAAGAGATACATTGGTGCTTGGCAGTCATCAATAATAAAGATAAGAAATTGCAGTATCTTGACTCAATGAAAGGAGAGGATAGTTCTGTGCTAGAAAAGCTGGCTAAATATTTTGCGGATGAAGTAAAGGACAAGAATGGAAAAGATATCGGTGTAAATACCTGGAAAAAAGAATTTGTGAAAGACCTTCCTGTTCAGAAAAATGGGTGTGATTGTGGGGTGTTTATGATCAAATATGTGGACTTTTATAGCAGGGGCCTGGAGCTGTATTTTGACCAGGTAAACATGCCTTACTTCCGGCGTAGAACAGCTAAGGAGATATTGAGATTGAAAGCTGAATAA 1401 0.4504 MGAMTTNRKRTEECMNVNLTNSDSSRKRSKLSTKPAPSATSAVARLSRYPQVSAPLAREVHAPCRPTKFPLAARVSIRVGDAMGNALITKFEKAKRSTLEKCRSVVEKGKEVIVVDAESDEPCADSSVEEPHGDGDKFRVQQQSQSTLSFDSELRNAELKVASRGKLWGSETQLDVESVHAYKKLLEDVGRRNGTFQRLNFEIDLNEKRRDHFNLLRPKKELDEESEALQEPFVALSSEEEDEVERAFSANRWTILVTHEHSNIEITGEKFQCLRSTGWLNDEVINLYLALLKEREQRQSHKFLKCHFFNTFFYKRLISGPNGYDFKSVRRWTSQRKLGYSLLECDKIFVPIHQEIHWCLAVINNKDKKLQYLDSMKGEDSSVLEKLAKYFADEVKDKNGKDIGVNTWKKEFVKDLPVQKNGCDCGVFMIKYVDFYSRGLELYFDQVNMPYFRRRTAKEILRLKAE 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00171 466 MobiDBLite consensus disorder prediction 1 42 - -
Viun9g00171 466 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 114 459 - -
Viun9g00171 466 SUPERFAMILY Cysteine proteinases 232 464 IPR038765 -
Viun9g00171 466 FunFam Ubiquitin-like-specific protease ESD4 223 464 - -
Viun9g00171 466 ProSiteProfiles Ubiquitin-like protease family profile. 264 436 IPR003653 GO:0006508|GO:0008234
Viun9g00171 466 Coils Coil 453 466 - -
Viun9g00171 466 Pfam Ulp1 protease family, C-terminal catalytic domain 279 460 IPR003653 GO:0006508|GO:0008234
Viun9g00171 466 Gene3D Adenoviral Proteinase; Chain A 221 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00171 Viun-Chr9 1042687 1048532 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00171 K08592 - gmx:100802161 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05730 3 62754840 62760012 Viun9g00171 9 1042687 1048532 PCT