Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00148 ATGGGAATGGAACCTCTTTGCACGCAAGCCTTTGGTTCAAGAAACTTGTGTTTGGTCTCTCTGACTTTACAAAGGACAATTTTCATGTTACTGGCAGCTTCACTACCCATCTGTCTCTTGTGGCTGAAGCTGGAGCCTCTGATGCTATGGCTTCAACAGAACCCTGAGATAACCAAAGTCGCAAGCATCTATTGCCGCTTCTCCATCCCAGACCTCATTGCCAACAGCTTGCTTCACCCAATTCGAATCTATTTACGTAGCAAAGGGACAACCTGGCCTCTACTGTGGTGCACTTTGCTGTCCATTCTCATACACATCCCTGTCGTCACTTTTTTCACCTTCAAACTCCACCTTGGTGTACCCGGGATTGCTATGTCAGCTTTTGTTGCCAACTTCAACACCCTTTTCTTCCTCCTATCATACATGCTCTACATGCGCGTCTCAAAGGGGTCACTTTCCATGCCTTTATTAATATCTCGCCCCTTGCCATCACGACAACAAGACCAAACCTTAACCACTGTTATCACTTCCACAACATTAACATCATCAACATCATCAACATCAACAATAACAACAACAACGACAACCTCAGCAGGCAAAGAGTGGGGCACCCTGATAAGGTTTTCCATTCAGAGTTGCTTAGGAGTGTGCTTGGAATGGTGGTGGTACGAGTTCATGACAATCCTAGCGGGTTACCTTTACAATCCTCGTGTTGCCTTAGCCACCGCCGGCATAGTAATTCAAACGACGTCTCTTATGTACACTTTACCAACAGCACTGAGTGCTTCGGTGTCAACAAGAGTGGGGAATGAACTCGGGGCGGGTCAACCCGAGAGGGCAAGGTTGTCGACAATTGTGGCAATAGGAATGGCTCTTGCAAGTTCGATATTGGGGCTGTTATGGACCACATTAGGGAGAGAGAGATGGGGAAGGGTTTTCACCAGTGACAGTGAGGTGTTGGAACTTACGATGAGTGTGTTACCCATAATTGGGATTTGTGAGTTAGCAAACTGTCCTCAAACCACAAGCTGTGGAATCCTTAGGGGAAGTGCTAGGCCTGGTGTTGGGGCAGGGATAAATTTCTATTCATTTTACTTGGTGGGGGCACCAGTGGCTATAGTGATGGCATTTTTTTGGAGACTAGGGTTGGTGGGTCTTTGCTATGGGCTGTTGGCAGCACAGATAGCATGTGTGGTCTCTATTCTAGTTGTGGTATACAACACAGATTGGGAAAGAGAGTCATTGAAGGCAAAAAGCTTGGTGGGAAAGACTTCATGTGACACAATGGAACATGGAGACCAAACACTAGTCAAATGTGAACAAGGTGTTGTCTTTCTCAATGAGAACAACAGATCCCTAAACTGA 1365 0.463 MGMEPLCTQAFGSRNLCLVSLTLQRTIFMLLAASLPICLLWLKLEPLMLWLQQNPEITKVASIYCRFSIPDLIANSLLHPIRIYLRSKGTTWPLLWCTLLSILIHIPVVTFFTFKLHLGVPGIAMSAFVANFNTLFFLLSYMLYMRVSKGSLSMPLLISRPLPSRQQDQTLTTVITSTTLTSSTSSTSTITTTTTTSAGKEWGTLIRFSIQSCLGVCLEWWWYEFMTILAGYLYNPRVALATAGIVIQTTSLMYTLPTALSASVSTRVGNELGAGQPERARLSTIVAIGMALASSILGLLWTTLGRERWGRVFTSDSEVLELTMSVLPIIGICELANCPQTTSCGILRGSARPGVGAGINFYSFYLVGAPVAIVMAFFWRLGLVGLCYGLLAAQIACVVSILVVVYNTDWERESLKAKSLVGKTSCDTMEHGDQTLVKCEQGVVFLNENNRSLN 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00148 454 PANTHER MULTIDRUG RESISTANCE PROTEIN 2 410 - -
Viun9g00148 454 Pfam MatE 213 373 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Viun9g00148 454 Pfam MatE 1 108 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Viun9g00148 454 CDD MATE_eukaryotic 1 416 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00148 Viun-Chr9 922345 924607 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00148 K03327 - gmx:100785533 749.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00148 9 922345 924607 Viun9g00148 9 922345 924607 ECH
Viun3g05718 3 62656764 62658939 Viun9g00148 9 922345 924607 PCT