Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g03023 ATGGCTGTTCAAAACTCTCTCCAAATAACTAGAAGTGGTACTGGTGATTATGATGATGATGGGCATGCCAAGAGGACTGGAACTACACGGAGTGCTGTGGCTCATATCATCACAGCAACTATTGGTGCTGGTGTTCTGTCTCTGGCATGGAGTACTTCCCAGTTGGGATGGATTGCAGGACCATTTTTCTTGTTTTTTTGCGCAATTGTGACATGTGTTTCTTCATTCCTCCTTTCCGATTGTTACAGAACTCTGGATCCTCTATCTGGGAAAAGAAACTACACTTACATGGATGCTGTTAGAAATTATCTTGGCAATAAAAGGACATGGTTGGCTGGTTTCCTTCAATATTTGAGCTTGTATGGGGTTACTGTTGCTTATGTAATTACCACAGCAACCTGTTTGAGAGCAATACTGAAATCAAATTGTTATCACAAGGAAGGGCATGAGGCTCCTTGTAGATATGGGGATACAGAATACATGATGCTGTTTGGACTAGTTCAGATCATAATGTCATTCATACCAGATCTTCATAACATGGCATGGGTTTCAATTGTTGCTGCCATAATGTCCTTTGCATATTCATCTATTGGACTTGGACTTGGCATCACAACAGTAATAGAAAATGGAAGAATTATGGGTAGTTTAACAGGAGTACCTGCTGCAAATATTTCTGACAAGTTATGGTTAGTCTTCCAAGCAATTGGTGATATTGCCTTTGCATATCCATACTCAGTCATCCTCCTTGAGATACAGGACACTCTAGAGTCTCCTCCACCAGAAAACAAGACCATGAAAAAGGCCTCCATGATTGCTATCCTCATTACAACATTCTTCTATCTCTGTTGTGGATGCTTTGGATATGCAGCTTTTGGAAATCAAACACCAGGGAATCTCTTGACAGGGTTTGGGTTTTATGAGCCCTATTGGCTCATTGACTTTGCTAATGCTTGCATTGTTCTTCACTTGGTGGGAGGATATCAGATTTTCTGTCAGCCGATATATGGTGCTGTTGACAGATGGTGTTCAAAAAGATACCCTAACAGTGGCTTTGTGAATAATTTCTACCAATTGAAACTTCCTTGGTTGCGAAGTTTTCGGCTAAACTTGTTCAGGATATGTTTCAGAACAGCCTATGTGATTTCCACTACTGGACTCGCGATCCTATTTCCTTATTTTAATCAAGTTCTGGGAGTGTTAGGAGCCTTAGGCTTTTGGCCATTGGCTATATATTTCCCTGTAGAGATGTATTTTGTGCAGAGGAAAATTGAAGCTTGGTCTAGAAAATGGATCGTCTTAAGAACCTTCAGCTTTATTTGCTTTCTTGTGTCACTACTAGGTCTCGTTGGATCACTTGAAGGAATCATAAGCGAGAAACTAAGCTAA 1386 0.4055 MAVQNSLQITRSGTGDYDDDGHAKRTGTTRSAVAHIITATIGAGVLSLAWSTSQLGWIAGPFFLFFCAIVTCVSSFLLSDCYRTLDPLSGKRNYTYMDAVRNYLGNKRTWLAGFLQYLSLYGVTVAYVITTATCLRAILKSNCYHKEGHEAPCRYGDTEYMMLFGLVQIIMSFIPDLHNMAWVSIVAAIMSFAYSSIGLGLGITTVIENGRIMGSLTGVPAANISDKLWLVFQAIGDIAFAYPYSVILLEIQDTLESPPPENKTMKKASMIAILITTFFYLCCGCFGYAAFGNQTPGNLLTGFGFYEPYWLIDFANACIVLHLVGGYQIFCQPIYGAVDRWCSKRYPNSGFVNNFYQLKLPWLRSFRLNLFRICFRTAYVISTTGLAILFPYFNQVLGVLGALGFWPLAIYFPVEMYFVQRKIEAWSRKWIVLRTFSFICFLVSLLGLVGSLEGIISEKLS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g03023 461 Gene3D Amino acid/polyamine transporter I 22 339 - -
Viun8g03023 461 PANTHER OS05G0424000 PROTEIN-RELATED 31 455 - -
Viun8g03023 461 MobiDBLite consensus disorder prediction 1 23 - -
Viun8g03023 461 Pfam Transmembrane amino acid transporter protein 25 456 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g03023 Viun-Chr8 37461172 37464171 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g03023 17 456 Organic Solute Cotransporters AT5G09220 53.499 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g03023 K24917 - gmx:100786621 866.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g03023 8 37461172 37464171 Viun8g03023 8 37461172 37464171 ECH
Viun6g01029 6 19791586 19794853 Viun8g03023 8 37461172 37464171 PCT
Viun8g03023 8 37461172 37464171 Viun6g01027 6 19790845 19794853 PCT