Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01029 ATGGATGGGAAAAGCTCTCTACAAATAACTAGAAGTGCTACGGGTGATTATGATGATGATGGACATGCCAAAAGGACTGGGAATTTGAAGAGTGCTGTAGCACATATCATTACTGCTGTTATTGGTTCTGGTGTTCTTTCTCTGGCATGGAGTACTTCTCAATTAGGGTGGATTGGAGGGCCAATTGCCCTGCTTTGTTGTGCAATTGTCACCTATATTTCTTCATTCCTTCTGTCTGATTGCTACAGAACTCCTGATCCTGTAACTGGGAAAAGAAACTACTCTTACATGGATGCTGTTAGAACTTATCTTGGTATTAAAAGAACATGGATAGCTGGCTTCCTTCAGTTTTTGACTTTATATGGGACTGGAATTGCTTATGTTCTAACCACAGCAACATGTCTAGGGGCAATTCTGGCCTCAAATTGTTATCACAAGAAAGGGCATCAAGCTCCTTGTCATTTTGAGGGGAACATGTATATGGTGATGTTTGGAGTTGTTCAAATTGTAATGTCATTCATACCAGATCTCCATAACATGGAATGGGTTTCAGTTGTTGCTGCAATCATGTCCTTTACATACTCATTCATTGGACTAGGACTTGGCATAGCAACAGTCATAAAAAATGGAAGGATTATGGGGAGTTTGTCAGGAATACCAACTAATACAGTTGCTGACAAATTTTGGGCAATCTTCCAAGCACTTGGTGACATTGCCTTTGCCTATCCATACTCAATTCTCCTTCTTGAGATTCAGGACACTTTAGAGTCTCCTCCACCAGAAAACCAGACCATGAAAAAGGCCTCAATGGTTGCAATCTTCATTACAACATTCTTCTACCTATGCTGTGGATGTTTTGGATATGCAGCTTTTGGAAATAACACACCAGGAAATCTCTTGACAGGCCTTTTGAAAGGTTCTGGGTTTTATGAGCCTTTCTGGCTTGTTGACCTTGCTAATGTTTGCATCATTATTCATCTGGTTGGAGGATATCAGGTTTACAGTCAACCTATATACAGTACTGCTGATAGATGGGCTTCAAGAAAATTCCCCAACAGTGGGTTTGTGAACAAATTCTACAAAGTGAAACTGCCTTTAGTTCCTGGTTTTCAGCTAAACCTTTTCAGGTTCTGTTTTAGAACAACCTATGTGATTACAACGGTCGGTGTTGCAATCTTGTTTCCTTACTTCAACGAAATTCTAGGAGTGTTAGGAGCCATAAACTTCTGGCCATTGGCTATATACTTCCCTGTAGAGATGTACTTTGTGCAGCACAAAGTTGAAGCTTGGAGTAGAAAATGGATTGTTCTTAGAACATTCAGCTTTGCATGTTTTCTTGTGAGTGTAATGGGGTTAGTAGGATCAGTTGTTGGCATTGTAAAAGAAAAAATGAGCTGA 1398 0.4006 MDGKSSLQITRSATGDYDDDGHAKRTGNLKSAVAHIITAVIGSGVLSLAWSTSQLGWIGGPIALLCCAIVTYISSFLLSDCYRTPDPVTGKRNYSYMDAVRTYLGIKRTWIAGFLQFLTLYGTGIAYVLTTATCLGAILASNCYHKKGHQAPCHFEGNMYMVMFGVVQIVMSFIPDLHNMEWVSVVAAIMSFTYSFIGLGLGIATVIKNGRIMGSLSGIPTNTVADKFWAIFQALGDIAFAYPYSILLLEIQDTLESPPPENQTMKKASMVAIFITTFFYLCCGCFGYAAFGNNTPGNLLTGLLKGSGFYEPFWLVDLANVCIIIHLVGGYQVYSQPIYSTADRWASRKFPNSGFVNKFYKVKLPLVPGFQLNLFRFCFRTTYVITTVGVAILFPYFNEILGVLGAINFWPLAIYFPVEMYFVQHKVEAWSRKWIVLRTFSFACFLVSVMGLVGSVVGIVKEKMS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01029 465 Pfam Transmembrane amino acid transporter protein 26 460 IPR013057 -
Viun6g01029 465 PANTHER OS05G0424000 PROTEIN-RELATED 31 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01029 Viun-Chr6 19791586 19794853 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01029 7 462 Organic Solute Cotransporters AT5G63850 52.288 3.84e-179 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01029 K24917 - gmx:100818535 841.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01029 6 19791586 19794853 Viun6g01029 6 19791586 19794853 ECH
Viun6g01029 6 19791586 19794853 Viun8g03023 8 37461172 37464171 PCT