Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02968 ATGTTGAGAAAGCACTCCCTTTTGCGTTCAACACCAAAACAAGTTTCGCTCTTTTTCGTTAGCCACTTCCACTCCACCCTTTTCACTCCATCACCAAAACAAGTGTTCCAAACCCATTGGTGGGGTTACCCCAAAAGCTTCAAACCTAGTTTCACTTTCACACCCTTTTGCAGACACAGTGTCAGCACCCTGCACAGTGGTTCCTCTGTAGAACAAATCGAAGATGATGAAGTTATTGAGCGAGATGTTTGGATGAAGATGAAAGACGAAGCAAGATTCGATGTCACTGTGGAACCCATCTTGTCAAGTTACTACAACACTTCCATTCTCTCTCACAAATCATTGGAAACCGCGTTGGCGAATCACCTTGCCGTGAAACTCAGCAGTGCGTCGCTTCCTAGCAGCACCCTTTCTGATCTTTTCGTGACGGTTTTGGAGACTGATGAAGCCATGATGGGTGCTGTGAAGAGTGATCTGGTTGCAGTTAAGGAGAGAGACCCGGCATGCCTGAGCCACGTGCACTGCTTCTTGAATTTCAAAGGCTTTCTGGCATGTCAAGCTCACAGGGTGGCTCACAAACTGTGGCTTCAGAGAAGGAAGGTTCTTGCTGTCATGATTCAGAACCGGGTTTCTGAGGTTTTTGCGGTGGATATTCATCCGGGGGCGAAGATTGGAAGTGGGATTTTGCTGGATCATGCAACTGGGATTGTGGTGGGAGAAACGGCTGTGATAGGGAACAATGTGTCAATTCTGCATAGTGTGACATTGGGAGGGACTGGTAAGGTTTCTGGAGACAGACACCCAAAAATTGGTGATGGGGTGCTGATAGGTGCTGGAACATGTATTTTGGGGAATATTAGGGTTGGTGAAGGAGCAAAAATTGGTGCTGGTTCAGTTGTCATCAAGGATGTGCCTCCAAGGACTACTGTTGTTGGTAACCCTGCTAAGCTTGTAGGAGGAAAGAACAACCCTGTTAAGTTGGATAAGATTCCTAGCTTGACGATGGACCATACTTCACATATTTCTGATTTCTATGATTATTGTGTTTAG 1050 0.4619 MLRKHSLLRSTPKQVSLFFVSHFHSTLFTPSPKQVFQTHWWGYPKSFKPSFTFTPFCRHSVSTLHSGSSVEQIEDDEVIERDVWMKMKDEARFDVTVEPILSSYYNTSILSHKSLETALANHLAVKLSSASLPSSTLSDLFVTVLETDEAMMGAVKSDLVAVKERDPACLSHVHCFLNFKGFLACQAHRVAHKLWLQRRKVLAVMIQNRVSEVFAVDIHPGAKIGSGILLDHATGIVVGETAVIGNNVSILHSVTLGGTGKVSGDRHPKIGDGVLIGAGTCILGNIRVGEGAKIGAGSVVIKDVPPRTTVVGNPAKLVGGKNNPVKLDKIPSLTMDHTSHISDFYDYCV 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02968 349 Pfam Serine acetyltransferase, N-terminal 83 187 IPR010493 GO:0005737|GO:0006535|GO:0009001
Viun8g02968 349 Pfam Bacterial transferase hexapeptide (six repeats) 267 301 IPR001451 -
Viun8g02968 349 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 276 304 IPR018357 GO:0016740
Viun8g02968 349 Gene3D Hexapeptide repeat proteins 217 337 - -
Viun8g02968 349 SUPERFAMILY Trimeric LpxA-like enzymes 84 319 IPR011004 -
Viun8g02968 349 SMART SATase_N_2_a 83 187 IPR010493 GO:0005737|GO:0006535|GO:0009001
Viun8g02968 349 Gene3D serine acetyltransferase, domain 1 66 216 IPR042122 -
Viun8g02968 349 PANTHER SERINE ACETYLTRANSFERASE 78 348 - -
Viun8g02968 349 FunFam serine acetyltransferase 1, chloroplastic 66 216 - -
Viun8g02968 349 NCBIfam serine O-acetyltransferase 155 316 IPR005881 GO:0005737|GO:0006535|GO:0009001
Viun8g02968 349 CDD LbH_SAT 214 314 IPR045304 -
Viun8g02968 349 FunFam Serine acetyltransferase 217 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02968 Viun-Chr8 37179648 37181098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02968 83 345 Miscellaneous Gene Families AT2G17640 52.045 8.94e-90 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02968 K00640 - gmx:100820316 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02968 8 37179648 37181098 Viun8g02968 8 37179648 37181098 ECH
Viun6g00921 6 18898866 18900432 Viun8g02968 8 37179648 37181098 PCT