Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02928 ATGCAGACTTCGTCGAAGACCATCTCTGCGGCTCTGCAACTGGTGGACGCCAAGAAAGAGAATTTGAAGAAAGCCTACGATGATCTTCAAACCCATTCCTCTCTTCTCTCTTCTTCCTTCTTTCCTCCTTCTTGGTCCCACATCGACTCACACTTCACCTCCCTCCACAACTCCCTCTCTGAACGATTTCACCTTCTCCAGACCCTCGAATCCCATGAGCAACACACTCACCCACCTCTTTCTCCCTCTAAAGATCCCACCTTTCCACCCTCCCGTTCCGACCCATCATCGCAGAACGACGTCGCATTGCCCAAAACCCACGCGGAACGCATGATCGCCCTCTGCAGCTGCATGGATGGAAAAGGGTTGCGGGACTACGTTGGGGATCATTTCAAAGACAAGGTTGCGCTCGAGGTTGAACTTCAGACTGCCCTCAAGCGTGCTTCCGATCCCGCGTCGATGATTCTCGATGCATTGGACGGTGTCGTGGGTGCGAATGTGGTGAAAGATGATAAGGAATTGCGCAAAAGGAAGAGGACTTGCGGGTTGTTGTTTCAGCAGTTGAGGGCTGCGTCCGTTTCTGTGAGTTTTAAGGTGAGTAAGAGAGCAAAGAAGTTGTGTGCGGAGTGGAAGGGGAGCTTGCCCAGTGAAGGTGGTGAAGGTATTGGGGCCATGACTTTCTTGCAGTTTGTAGCGGCTTATGGGTTGTTATCTGAATTGACAAATAATGAGATTTTCACCTTCTCTGCCATGGCTGCTGCCAATGATGATCTTCCTGAGCTCTACCGAAGTATTGGTTTGACGGACAAAGTTCCAGGTCTTGTTCAGAAACTTGTTGACAGGTGTAGACATATTCTGGCTGTCAAGTATATTTTTGAGTTCAATCTTGCGGATAAGATTCCACCAATTCCCATTTTGAAAGCTCACGTGAATGAATCTCAGAAACTTGCTAAAAGACTTTCTGAGGAAGGGAAGTCACTGAATGAAATCACAGCCAGAGAAGTCCATGCACTGAAATCTGCAATCAAGGTTATTGAAAGTCATAATCTTCAATCGGAATATCCACCTGAAAGCCTTCAACAGCGTTTAGAACAATTGACGAAGCATAAGGGAAATTTAAAATATGGTGCATCCGCTTTTTCTGCAAAGCCTCCCTCTCATCAGCAGCAACAAGGTGGGCTCAAGCGTCCTCGAATTTCTGCCCCCATTGGTTCTGCAGCTGTCCTGAATAGTGTCGGTGGTGCCAGTTCAACTGCTCACCACTACAAACATCCTCATTTCCAGTCATCAGGTTTGTTGCGGGAGCAACAACCTTTTTTCCACTCACCAGGTTTGTTGTTGGAACAACAACCTCATTTTCAGTCATCAGGTTTGTTGCCTGAACAACAACCTCGTTTCCAGTCACCAGGTTTGTTGCCAGAACATCGAAGTCCCTTCATTAACTTGCCAACCATGTCATATGGCATGAAGGCTCCAACCCCAACCATCTTGCCTTATACAGGCGCTTCGGCTGGGCCTTATGGTCTTGATGATGTCCCAATGGGTCCCAGTGGCAACCTTGGTCAAGGTGGTTCTCTTCCAAATTCATCAGAGCCACTTGTGCCTTCTGGTTATCATGATAGTGTCTCTGCCTATGGTGGTTATGGTCTGCAGCGTTATTATCGAACATCTTATCCTCAGTAG 1683 0.4771 MQTSSKTISAALQLVDAKKENLKKAYDDLQTHSSLLSSSFFPPSWSHIDSHFTSLHNSLSERFHLLQTLESHEQHTHPPLSPSKDPTFPPSRSDPSSQNDVALPKTHAERMIALCSCMDGKGLRDYVGDHFKDKVALEVELQTALKRASDPASMILDALDGVVGANVVKDDKELRKRKRTCGLLFQQLRAASVSVSFKVSKRAKKLCAEWKGSLPSEGGEGIGAMTFLQFVAAYGLLSELTNNEIFTFSAMAAANDDLPELYRSIGLTDKVPGLVQKLVDRCRHILAVKYIFEFNLADKIPPIPILKAHVNESQKLAKRLSEEGKSLNEITAREVHALKSAIKVIESHNLQSEYPPESLQQRLEQLTKHKGNLKYGASAFSAKPPSHQQQQGGLKRPRISAPIGSAAVLNSVGGASSTAHHYKHPHFQSSGLLREQQPFFHSPGLLLEQQPHFQSSGLLPEQQPRFQSPGLLPEHRSPFINLPTMSYGMKAPTPTILPYTGASAGPYGLDDVPMGPSGNLGQGGSLPNSSEPLVPSGYHDSVSAYGGYGLQRYYRTSYPQ 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02928 560 MobiDBLite consensus disorder prediction 512 537 - -
Viun8g02928 560 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 103 389 - -
Viun8g02928 560 Coils Coil 12 32 - -
Viun8g02928 560 MobiDBLite consensus disorder prediction 521 536 - -
Viun8g02928 560 Pfam Frigida-like protein 108 374 IPR012474 -
Viun8g02928 560 MobiDBLite consensus disorder prediction 71 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02928 Viun-Chr8 36985417 36989506 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02928 - - var:108322861 1019.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g00900 6 18748464 18753317 Viun8g02928 8 36985417 36989506 PCT