Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00900 ATGGATACACTGAACACGATCTCAACGGCACTGAACCTGGTCGATTCCAAGAAAGAGAATCTGAAGAAAGCATTTGATGATCTTCAATCCCTTCTCTCTCCTCTTCCTCTCGCATGGCCAGACCTTGATTCTCACTTCACCTCGCTCCACCACTCTCTCTCCCACCGCCTCCACCTCCTCCAATCCCAAATCCTAACCCTAACCACAACCCCAATTCCCGACCCACCTGCTCAAACCCCTATTGAAGCACATTTTTCATCAAACCCTAAAATCCCATCATCGAATCATGTCGAATCTTCACCTGGGGTGTCCCCCCAAAACGACGCCGTTCCAGGCTCGGTTACGCCTGGAAACGAATTGGTCGTTCTTTGCGAGAAAATGGACGGCGTGGGGTTGAGGAATTACGTCAATGACAATTTTTTGGACATGGCCAGGGTTCAGGCGGAACTTCCCGGTGCGTTTCGCCATGCGCCGGACGCGGGTATGATGGTTCTGGATGCGTTGGAGGGGTTTCATGGAGATGGTAACGGATTGAAGAAATGGGAATTGAGGAATATGAGGAAGAGTTGTGTTGTGCTGTTGAGGCAATTCAGGGTTGCCGCTCTAAGTTTGAGTGCTGAGGCCAGTTTGAGGGCTGTGAAGTTGGCCCAGGCATGGAAAGAGAAGTTGGTGGGTGATGATAACAACGTGTTTGAAGCTTTGGGGCTTTTGCATTTGATTGCTTCATTTGGTTTGGTGTCTGAATTCAGCTGGGATGAGCTTGTTGACTTTTCGGTCGTGGCCCCCGCCAATGAGGATTTCCCAGAGCTGTGCCGGGCGATCGGGTTGACAGAGAAAGTTCCCGATATTGTTCAGAAACTTATAGATAAGGACAAACATATCCCAGCTGTCAAGTATATTCTCGAGTTTAATCTTGCTGATCAGATTCCACCTGTTCCTGTTTTGGAAGCTGCTGTGGATGAAGCTAAGAAACTTGCTAGAAAACTTTCCGAAGAAGGAAATTCATCTAGTGAGAGTACTGCTAGAGAAATTCATACACTGAAATTGGTGATCAAGATTATTGAGAATTATAAGCTTGAATCTGAACACCTACGAGCCACCGTTGAGCAGCGTATAGAGCAATTAAAGAGGCAGAAGACAAATAATAAACGATCTACTGCAGCACCTGCTTCAAAACCTCAGCATAAGCAGCAGCAGCAACAGCAAAAGAGGAATATGCAAAAGCAGCAGCAGCCTAGGATCAAGCATCCTCGTGCATCTGCTCCAATTGTTCCTGCAGCTGTCCTCAAGAATGTCAATTCAGCAATGCACCATTACCAGCAACCTCGTGTCCATCCATCAGGTTTGTTTCCAGAGCATCCAAATCCCTATAGGAGCTCGTCAGCCATGCCATTTGGCATGATGGCTTCTACCCCAAAATTTCTTCCATATGCAGGTCCTTCAGCCGGATCTTATTATGGCCATGATGGTGTCCCAATGGGTCCCCGTGGCAACCCCAATGTAAGTGGTTCTCATCTAAGCTCATCAGAGCCACATGTGCCAACTGGTGGTTATTATGATAGAACCTCAACCTTTGGTGGTATTGGTCTGCAACATCATTACCAAGCATCTTATTACCCTCAATAG 1626 0.4729 MDTLNTISTALNLVDSKKENLKKAFDDLQSLLSPLPLAWPDLDSHFTSLHHSLSHRLHLLQSQILTLTTTPIPDPPAQTPIEAHFSSNPKIPSSNHVESSPGVSPQNDAVPGSVTPGNELVVLCEKMDGVGLRNYVNDNFLDMARVQAELPGAFRHAPDAGMMVLDALEGFHGDGNGLKKWELRNMRKSCVVLLRQFRVAALSLSAEASLRAVKLAQAWKEKLVGDDNNVFEALGLLHLIASFGLVSEFSWDELVDFSVVAPANEDFPELCRAIGLTEKVPDIVQKLIDKDKHIPAVKYILEFNLADQIPPVPVLEAAVDEAKKLARKLSEEGNSSSESTAREIHTLKLVIKIIENYKLESEHLRATVEQRIEQLKRQKTNNKRSTAAPASKPQHKQQQQQQKRNMQKQQQPRIKHPRASAPIVPAAVLKNVNSAMHHYQQPRVHPSGLFPEHPNPYRSSSAMPFGMMASTPKFLPYAGPSAGSYYGHDGVPMGPRGNPNVSGSHLSSSEPHVPTGGYYDRTSTFGGIGLQHHYQASYYPQ 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00900 541 MobiDBLite consensus disorder prediction 77 114 - -
Viun6g00900 541 Coils Coil 358 385 - -
Viun6g00900 541 MobiDBLite consensus disorder prediction 81 113 - -
Viun6g00900 541 Coils Coil 312 332 - -
Viun6g00900 541 MobiDBLite consensus disorder prediction 373 421 - -
Viun6g00900 541 Pfam Frigida-like protein 116 386 IPR012474 -
Viun6g00900 541 MobiDBLite consensus disorder prediction 381 414 - -
Viun6g00900 541 MobiDBLite consensus disorder prediction 490 518 - -
Viun6g00900 541 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 115 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00900 Viun-Chr6 18748464 18753317 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00900 - - gmx:102669439 758.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g00900 6 18748464 18753317 Viun6g00900 6 18748464 18753317 ECH
Viun6g00900 6 18748464 18753317 Viun8g02928 8 36985417 36989506 PCT