Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02922 ATGGAATCCCCCCAGTCTGTCGTGTCACCATTCAAGAACTCTGTCTTGGGTGAAGCTGAGATGTACAAGTCTGATATTTACACGCAAAGCTCGGGTCCTTTCTCTAAGGACATTGAAGTCAATGGAAAGGAAGCTATCAGGTCCAATTCAGAGGATTTCATTGGTGCTGTTGATGTTTACATTCATCAGGCCAGGGACATTCATAACATCTGCATATACCACAAGCAAGATGTTTATGCTAAGATTAGCTTGACTAGTAATCCCGAGAACACCGTCTCTACCAAGACCATCAATGGAGGAGGAAGAAACCCTGTCTTTAATGAGAATCTTCGTCTAAACGTTAGAACAGTTGATTCTGCTGTCAAATGTGAAATCTGGATGCTGAGCAGGGTGAAGAATTATCTTGAAGATCAGTTACTTGGCTTTGCTTTGGTGCCTTTGTCAGAAGTGCTGATGAAAGATGGTAAACTAGAGAAAGAGTTCTCTCTTTCCTCAACTGATCTATTCCATTCACCAGCTGGTTTTGTGCAGTTGTCTCTTGCATACACTGGCACTTCGCCTGATGTTATTGCAATTTCTGCAATGCCTAATGAGTTGGCTGCAAATGGCACTGACAAGGACTCTGAAACTTGTGAATCACTGGTCAGAGACTTAGACAAGATTGAATTCCCGGATCCAAAAATTGTAAATGAAGACCACTTGATGGTTTCAGAATACTTCGGTATTCCTTGTGAGGAGAGTCAGTGTTCTGGTAGCTTGACCACTAATGATACTGAAAATCTGAGTTCTGAAGCAGGTGTTCAGCTTGTGGAGAGTTTCTCAGCATGCAGTGTTGAGTCTGCACAACCTCCTAAGGTTGGTTCTCCACCTACCAGTGTGTCAACAAATGGAGTTTCATCTCCTTCAGCGGCTGCAAGCTCAGACTCATCTGATCCTCCTCCTCCTCCTCCTCCTCCTGCTGCTGCTGCTGCTTCTAAGTCTCCAAATCAGGAACAAGTTTCGGCCAACAAAGAGAAAATTGGAGAGGTCAACAATGGTGAGACTGATTCCTCAAATGGGGTGCTGAATGAGTCATTCCCTAAGCCTGTTGTGACTGTTAACATCGAGCCTGAGTCAAATGTGGTGCAGCAGGACATAGTAGACATGTATATGAAAAGCATGCAGCAGTTCACAGAGTCATTGGCGAAAATGAAGCTTCCTATGGACTTTGAAAGTGGACCTACCAGTTCAGGAAACTCAAGCTCCGAACAGAAGATACAGACACCAAAGAGCTCTAACTCCCGTGTGTTTTATGGCAGCAGGGCTTTCTTCTGA 1314 0.4429 MESPQSVVSPFKNSVLGEAEMYKSDIYTQSSGPFSKDIEVNGKEAIRSNSEDFIGAVDVYIHQARDIHNICIYHKQDVYAKISLTSNPENTVSTKTINGGGRNPVFNENLRLNVRTVDSAVKCEIWMLSRVKNYLEDQLLGFALVPLSEVLMKDGKLEKEFSLSSTDLFHSPAGFVQLSLAYTGTSPDVIAISAMPNELAANGTDKDSETCESLVRDLDKIEFPDPKIVNEDHLMVSEYFGIPCEESQCSGSLTTNDTENLSSEAGVQLVESFSACSVESAQPPKVGSPPTSVSTNGVSSPSAAASSDSSDPPPPPPPPAAAAASKSPNQEQVSANKEKIGEVNNGETDSSNGVLNESFPKPVVTVNIEPESNVVQQDIVDMYMKSMQQFTESLAKMKLPMDFESGPTSSGNSSSEQKIQTPKSSNSRVFYGSRAFF 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02922 437 SMART C2_3c 56 159 IPR000008 -
Viun8g02922 437 ProSiteProfiles C2 domain profile. 42 161 IPR000008 -
Viun8g02922 437 Pfam C2 domain 56 161 IPR000008 -
Viun8g02922 437 CDD C2 57 163 - -
Viun8g02922 437 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 53 185 IPR035892 -
Viun8g02922 437 MobiDBLite consensus disorder prediction 405 431 - -
Viun8g02922 437 Gene3D C2 domain 51 200 IPR035892 -
Viun8g02922 437 PANTHER EXPRESSED PROTEIN 1 437 - -
Viun8g02922 437 MobiDBLite consensus disorder prediction 280 358 - -
Viun8g02922 437 MobiDBLite consensus disorder prediction 401 437 - -
Viun8g02922 437 MobiDBLite consensus disorder prediction 325 358 - -
Viun8g02922 437 MobiDBLite consensus disorder prediction 308 323 - -
Viun8g02922 437 MobiDBLite consensus disorder prediction 280 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02922 Viun-Chr8 36942432 36945365 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02922 - - gmx:100781587 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02922 8 36942432 36945365 Viun8g02922 8 36942432 36945365 ECH
Viun6g00890 6 18674884 18677462 Viun8g02922 8 36942432 36945365 PCT