Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02893 ATGGCTCCCATGGGAGACAATGTTGTCGTGTCCAACATGGAACTTGAGAGGTTGCTCAGCATGAAAGGAGGCAAAGGAGAAGCCAGCTATGCCAACAATTCCCAAGCACAGGCCATACATGCGAGGTCGATGCTTCATCTTCTGAGAGAGACTCTGGACAGAGTTGAGCTTGTCGAGGGTCGTGAGGTGCCGTTTGTGGTGGTGGATTTGGGGTGTTCGTGTGGGAGCAACACCATAAACGTCGTCGATGTCATGATAAAGCACGTTATGAAACGCTACGAGGCGTTGGGGTGGCAGCCACCGGAGTTTTCAGCTTTCTTCTCCGACCTTCCCAGCAATGACTTCAACACGCTCTTTCAGCTGCTTCCTCCTCTCGCCAACCACGGCGTCAGCATGGAAGAATGCCTTGCCGCCGACAACCACCGCTCCTACTTCGCCGCCGGAGTCCCCGGTTCTTTCTACCGGAGGCTTTTTCCGGCGAGGTCTGTGGATGTTTTCCACTCGGCCTTCTCTTTGCACTGGCTTTCTCAGGTGCCAGAAAGTGTTGTGGACAAGAGGTCAAGTGCATACAACAAAGGAAGAGTTTTTATCCATGGTGCTGATGAGAGCACAGCAAATGCTTACAAGAAACAATTCCAAACAGATTTGGCAGGGTTTCTGATGGCAAGATCAGTGGAGATGAAGAGAGAGGGGTCCATGTTCTTGGTTTGCTTGGCCAGAACTTCAGTGGACCCTACAGACCAAGGTGGGGCAGGCCTTCTTTTTGGGACCCACTTTCAGGATGCTTGGGATGATCTTGTCCAAGAGGGGTTGATTAGCCAAGAAAAACGAGACAGTTTTAACATTCCAGTTTATGCAGCAAGCCTGCAAGACTTCAAGGAGGTGGTTGAAGCGAATGGTTCATTCACCATAGACAAGCTTGAGGTATTCAAAGGAGGAAGTCCACTTGTGGTGAATCAACCAGATGATGCAAGAGAAGTAGGAAGAGCTCTAGCCAACAGCTGCAGGACAGTGTCAGGAGTTCTTGTTGATGCTCACATTGGTGACAAACTGAGTGAGGAACTTTTTCTAAGAGTGGAGCATAGAGCCACTAGCCATGCCAAAGAGCTATTAGAGAAACTACAGTTCTTTCACATAGTTGCATCCCTTTCCTTTGCTCAATGA 1164 0.4957 MAPMGDNVVVSNMELERLLSMKGGKGEASYANNSQAQAIHARSMLHLLRETLDRVELVEGREVPFVVVDLGCSCGSNTINVVDVMIKHVMKRYEALGWQPPEFSAFFSDLPSNDFNTLFQLLPPLANHGVSMEECLAADNHRSYFAAGVPGSFYRRLFPARSVDVFHSAFSLHWLSQVPESVVDKRSSAYNKGRVFIHGADESTANAYKKQFQTDLAGFLMARSVEMKREGSMFLVCLARTSVDPTDQGGAGLLFGTHFQDAWDDLVQEGLISQEKRDSFNIPVYAASLQDFKEVVEANGSFTIDKLEVFKGGSPLVVNQPDDAREVGRALANSCRTVSGVLVDAHIGDKLSEELFLRVEHRATSHAKELLEKLQFFHIVASLSFAQ 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02893 387 Gene3D - 19 368 IPR042086 -
Viun8g02893 387 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 20 368 IPR005299 GO:0008168
Viun8g02893 387 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 384 IPR029063 -
Viun8g02893 387 Pfam SAM dependent carboxyl methyltransferase 63 383 IPR005299 GO:0008168
Viun8g02893 387 Gene3D Vaccinia Virus protein VP39 33 313 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02893 Viun-Chr8 36811586 36815723 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02893 K18848 - gmx:100807953 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02893 8 36811586 36815723 Viun8g02893 8 36811586 36815723 ECH
Viun6g00832 6 18128082 18131414 Viun8g02893 8 36811586 36815723 PCT