Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00832 ATGCCAGACAATGTTGTTGTTTCCAACATGGAGCTTGAGAGATTGCTTAGCATGAAAGGAGGCAAAGGTGAAGGAAGCTATGCCAACAATTCCCAAGCTCAGGCCATCCATGCCAAGTCCATGCATCACCTTCTGAAAGAAGCCCTAGATGGAGTTCAACTTCAAGACCCTAATATCCCTTTTGTGGTGGTGGATTTGGGGTGTTCATGTGGCAGCAACACCATCAATGTGGTGGATGTGATCATAAAGCACATCATCAAACGCTATGAGGCTTTAGGATCAGAACCTCCTGAGTTTTCTGCTTTCTTCTCAGACCTTCCTGGGAATGACTTCAACACCCTCTTCCAGCTCCTTCCTCCCTTAGCCAACTATGGAGTTAGCATGGAGGAGTGCCTTGCCGCCACCAACCACCGTGCCTACTTCGCCGCCGGCGTCCCTGGCTCCTTCTACCGGAGACTTTTTCCGGCAAGGTTCATTGATGTTTTCCACTCAGCCTTTTCCTTGCATTGGTTATCTCAGGTACCAGAATGTGTGATGGAGAAGAGGTCAAGTGCATACAACAAGGGGAGGGTGTTCATCCATGGTGCTAGTGAGATCACAGCAAAAGCTTACAGAAAACAATTTCGTTCAGACTTGGCTGGGTTCTTGAGTTCAAGGTCTGTGGAATTGAAGAGAGGGGGGTCCATGTTCTTGGTTTGCTTAGGCAGAACTTCTGTGGACCCCACAGACCAAGGTGGGGCAGGACTCCTATTTGGGACCCACTTTCAGGATGCTTGGGATGATCTTGTCCAAGAGGGATTAATTAGCAGTGAGAAAAGAGACAGCTTCAACATTCCAGTTTATGCACCAAGCCTGCAAGATGTGAAGGAGGTGGTTGAATCTGATGGTTCATTTGCCATAAACAAGCTTGAGGTGTTCAAAGGAGGAAGCCCTCTTGTGGTGAACCAGCCAGGTGATGCTAGAGAAGTAGGAAAGGCCCTTGCCAACACCTGCAGGAGTGTGTCTGGTGTTCTTGTTGAAGCTCACATTGGTGACAAGCTTAGTGAAGAACTGTTTCTCAGAGTGGAACGTAGAGCAGCACGCCATGGCAAGGAGTTATTGGAGCAGTTACAGTTCTTTCACATAGTTGCATCCCTTTCTTTTGCTCAATGA 1152 0.4809 MPDNVVVSNMELERLLSMKGGKGEGSYANNSQAQAIHAKSMHHLLKEALDGVQLQDPNIPFVVVDLGCSCGSNTINVVDVIIKHIIKRYEALGSEPPEFSAFFSDLPGNDFNTLFQLLPPLANYGVSMEECLAATNHRAYFAAGVPGSFYRRLFPARFIDVFHSAFSLHWLSQVPECVMEKRSSAYNKGRVFIHGASEITAKAYRKQFRSDLAGFLSSRSVELKRGGSMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVQEGLISSEKRDSFNIPVYAPSLQDVKEVVESDGSFAINKLEVFKGGSPLVVNQPGDAREVGKALANTCRSVSGVLVEAHIGDKLSEELFLRVERRAARHGKELLEQLQFFHIVASLSFAQ 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00832 383 Gene3D - 16 362 IPR042086 -
Viun6g00832 383 Pfam SAM dependent carboxyl methyltransferase 59 379 IPR005299 GO:0008168
Viun6g00832 383 Gene3D Vaccinia Virus protein VP39 30 309 IPR029063 -
Viun6g00832 383 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 17 360 IPR005299 GO:0008168
Viun6g00832 383 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 380 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00832 Viun-Chr6 18128082 18131414 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00832 K18848 - gmx:100801476 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g00832 6 18128082 18131414 Viun6g00832 6 18128082 18131414 ECH
Viun6g00832 6 18128082 18131414 Viun8g02893 8 36811586 36815723 PCT