Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02837 ATGAAAACATTGAACAAATTTGAAGTTGTGGTGCTCTTTCTCCTTGCTCTTCTCCTTGGGATCACACCCTTGTTACCTTCTTCTCTCAGGCCAACCTTCCTTTACTTCATCTTCAACGTTCTCATCGTTGCACTAGGAGCAGAAGCTGGTCTTCTCTCAGTTTTTTCTAAGCCTTTAGAAGTCACAAAGCAACATGTTGAAGTGTGTGAACCTGAAGAGGAAAAGGAAGAAGCATTCAACACAGACCACACTGAAATTAAGACTGAGGTTGTTCAAGTGTTTTCTTCTGATGAGAAGATTGTTGGTGTCAGTGAAGTGGATGAGGTGAAAAAGTGTAGTTCAATGCCAAATCTTTTGATCATAGAAGGTGGAGAAAGTGAACAGATAGATGAGGAAATTGAAACAGTTCATGGGCAAGAGTTGTTTGCGAAAGCTGAAGCCTTCATTGGGAACTTCTACAAACAGTTAGAGATGCAGAAAGAGGTTTATCAGGAATCATTTTAG 504 0.4028 MKTLNKFEVVVLFLLALLLGITPLLPSSLRPTFLYFIFNVLIVALGAEAGLLSVFSKPLEVTKQHVEVCEPEEEKEEAFNTDHTEIKTEVVQVFSSDEKIVGVSEVDEVKKCSSMPNLLIIEGGESEQIDEEIETVHGQELFAKAEAFIGNFYKQLEMQKEVYQESF 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02837 167 PANTHER OS01G0532300 PROTEIN 1 161 - -
Viun8g02837 167 Pfam Cotton fibre expressed protein 139 161 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02837 Viun-Chr8 36539064 36539783 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02837 - - vra:106764543 195.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g00809 6 17875387 17876540 Viun8g02837 8 36539064 36539783 PCT