Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00809 ATGAACAAGTTCAAGAAATCTCAAGTTCTAGTGCTCTGTCTTCTACTTGTTCTTCTTGTCATCACACCCTATTTACCTTCCTCACTCAGACCAACCTACCTGTATTTCATCATAAACTTTCTCATCATGGCACTTTGTGCAGAAGCTGGACTCCTTTCAGTTTTTCCTAGCCCTATGGAAGATAAAAAGCCATCAGAAGCAAGTTCTGAGAAAAGAGAAGGCTCCAATTCCACCCCTATAGTTTCTGATGCTGTCTCAGAACAAGCTGAAAAGTGTGCATCTGAAAGGGTTGTTTCTGTGACCAACATGATGCAAAACTCTCCTCCAATGCCTACTAGCCTTTTCTTCATAGAAGCTGATGCAGAAGGCATGGATGAAGAAGATGAAGCAGAAGAGGAGATTGGAGGAGTTAATGGGCAAGAGCTGTTTGCAAAAGCTGAGGCCTTCATTGGGAACTTCTACAAGCAACTGAGGATGCAGAGTGAGGAATCTTGGATTTATCAGAAAGGCTTTTAG 516 0.4244 MNKFKKSQVLVLCLLLVLLVITPYLPSSLRPTYLYFIINFLIMALCAEAGLLSVFPSPMEDKKPSEASSEKREGSNSTPIVSDAVSEQAEKCASERVVSVTNMMQNSPPMPTSLFFIEADAEGMDEEDEAEEEIGGVNGQELFAKAEAFIGNFYKQLRMQSEESWIYQKGF 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00809 171 MobiDBLite consensus disorder prediction 62 88 - -
Viun6g00809 171 Pfam Cotton fibre expressed protein 140 165 IPR008480 -
Viun6g00809 171 PANTHER OS01G0532300 PROTEIN 1 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00809 Viun-Chr6 17875387 17876540 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00809 - - ccaj:109811312 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g00809 6 17875387 17876540 Viun6g00809 6 17875387 17876540 ECH
Viun6g00809 6 17875387 17876540 Viun8g02837 8 36539064 36539783 PCT