Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02830 ATGGAGGAGCACACCTTCGTGTCCAAAGCGAGGAACGCCTTTCATTCTGCGGCGGCAAAAGCGGAGCGCGTGCTCATGGATTTCAAATCCGATCGAGAAGATCACGATAGGAACTCGTCGCAGGAAGCGGATTCTCCCAACAGCAACATCGAAAACGAGTCCAAGGAGGTTCGCAGTGATTTGAAGCATATAAAGTGGAGGCCTCCGCATATTGGAATAAAGCAGGATTGGCAAGATAGGATAAAGAACATCGGGAGAGGGAGAAAAGAAGTTGAAGATACTGATAAAGTTGGGGATGCGAACATGGCAGTTCCATTTTATGATGATAATTTATACACCCTGAATGTGAAGAAAGATCAAGATGCTAAGGCTTCAGAATTATTTCCTTCAGTTGAAAGCCTAACTGCTGCAACTAAAGATCCTATTCCTCCGTCATCTGTACTCAAGCAATTGGCTGTAGCTGTTGAGGCTGGAAGTAAAGTGAAGTCAGTGAAAGAATTTATAGGTTCATCAGGAGGTTCTTCACTTGCAAATGACAGGGCAGCCTTGAGTCTCTCTGCTGTTAAGGCGTTAGTGCTACGTGAAAAGGAGGATGGACACACTCAGGAGTTTATTAGCAATGAGAAAGTTGTGCAGTTAATCAGTTCTTTGTTTGATCCAGAGGGAGATTTCCTTACGAGAAAGATCAACTCTAATACAGAGGAAACTGCCATGACGTCTTTGCCAAGAGATATTCATGGTGCTCCTCCTGAAAGTCTTGTTGTTAAGCTAGCTGAAATCCTTGGAAACTACAGGACTGTCCGTAAAATGGCTCTTTTCTGGTGCTGTGTTGTTGCTGAAGTAAGAAAACTTTGGTCTGAGGGGCAACACTTACCAGGAGTCCCCAAGAACGAGATTCCTGATTTGAATTCATGTCTTGTATATCAACATTTTCAATTAATTAATTGCTGCATTTCTCGGAAAAGGTTTCGTGTTGTTGCCACTGAATCTCTAGACTCTATGATGAAGCAAGCTAGCTCAGACACAAAAGAATCATCTGATTATAATGCTGGAGCTCCTGCAAGCCCTGTTCTATATGCTAGATTAAACAGTGGGGAGCTTGTTCTACGACTTGGTGCAGATCGTCTTGCTGGAGATATGACATTGTTGGAAACTGGCGAGCCTGTGTATTCTCCAGTCACCCAGGAAGGGCCTTTGCTTACTGAGGATCTAATCAGGGAAACAGAGGAGTTTGTGCTGCGGACTGGGAGTGTTGGAGCTGGGTGCTCTCAATTGCTCTCAGATATGCAAGCTTTCAAGGCTGCAAATCCTGGATGTATTTTAGAGGATTTTGTAAGATGGCACTCTCCTCCTGATTGGACAGACAATGAGGCAAGTGCAGAGGATAGTGATGTTTTTGATAGTGCAGAGTCATTGTCTGCCAAAGGTCAGCTAAGTCGGCGAATGCAAAAAGAAGGTAATTTGTGGCGTGAATTGTGGGAAACATCAAAACCAGTACCAGCTGTTAAGCAGGCACCCCTGTTTGATGAGGATTTGGCAGTGGAGGGCATCCTCAATGCTTTTGAGGACATCGATCTTTCTGATCTTTTTCTACAGCTGTTTGTTTCTTTGCTTGGTTTAGGATTTGCAATTGCTGAACCTATGCTGTCTAGTAATGGTGACTTCTCGAAGTTATTCTATGACTGCAAGGAGTACATAATTGCCGCTTGTCAAAGCACCAGATTAAATGAGAAAGTTGATGATCTTTTCCAGGCATATGAAACAGTGGAGAGAATGTTATTAAATCCTGAAGAAGCACTAAAGATGATTAAGCAGACAGACGAATCAACTATGGTTAGTGATGAACCAAAGAGCCCGTTGAAGAAGCTTAAACTTATCTTTGCCGGCAAAGATAAACTGAGGAAGTCTCTCTCAAAGGATCAGTTAAATGAGGAAGAAAAGCCTGGTCGGCAATCATTCTCAAGTTTCTTTGATAGCAAGGCATCTTTGTTTTCAAAGAAGCATCCAAAGTCTGGATCCCCATCTCCTTCTGAGAAATCTCCTCTCGATATTGGTTGGTCGGTTGTATAG 2070 0.4324 MEEHTFVSKARNAFHSAAAKAERVLMDFKSDREDHDRNSSQEADSPNSNIENESKEVRSDLKHIKWRPPHIGIKQDWQDRIKNIGRGRKEVEDTDKVGDANMAVPFYDDNLYTLNVKKDQDAKASELFPSVESLTAATKDPIPPSSVLKQLAVAVEAGSKVKSVKEFIGSSGGSSLANDRAALSLSAVKALVLREKEDGHTQEFISNEKVVQLISSLFDPEGDFLTRKINSNTEETAMTSLPRDIHGAPPESLVVKLAEILGNYRTVRKMALFWCCVVAEVRKLWSEGQHLPGVPKNEIPDLNSCLVYQHFQLINCCISRKRFRVVATESLDSMMKQASSDTKESSDYNAGAPASPVLYARLNSGELVLRLGADRLAGDMTLLETGEPVYSPVTQEGPLLTEDLIRETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTDNEASAEDSDVFDSAESLSAKGQLSRRMQKEGNLWRELWETSKPVPAVKQAPLFDEDLAVEGILNAFEDIDLSDLFLQLFVSLLGLGFAIAEPMLSSNGDFSKLFYDCKEYIIAACQSTRLNEKVDDLFQAYETVERMLLNPEEALKMIKQTDESTMVSDEPKSPLKKLKLIFAGKDKLRKSLSKDQLNEEEKPGRQSFSSFFDSKASLFSKKHPKSGSPSPSEKSPLDIGWSVV 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02830 689 MobiDBLite consensus disorder prediction 25 56 - -
Viun8g02830 689 MobiDBLite consensus disorder prediction 664 689 - -
Viun8g02830 689 MobiDBLite consensus disorder prediction 25 41 - -
Viun8g02830 689 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 63 675 IPR045700 GO:0005096|GO:0043547
Viun8g02830 689 MobiDBLite consensus disorder prediction 664 680 - -
Viun8g02830 689 Pfam Rab3 GTPase-activating protein catalytic subunit 370 522 IPR026147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02830 Viun-Chr8 36508635 36515604 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02830 K18270 - gmx:100818643 1097.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02830 8 36508635 36515604 Viun8g02830 8 36508635 36515604 ECH
Viun6g00804 6 17804780 17812021 Viun8g02830 8 36508635 36515604 PCT