Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00804 ATGGCCTCCGCTCCGTTTTATGATGAACATTCGTACATTCTCAATGAGCAGAATGATCTTATTGCCAAGGTTGAAGGCTTAGCTGCTGCGACTGAACACCCCATCCCTCCATCGTCTGTCCTGAAGCAGTTGGCTATAGCTTTTGAGGCTGGAAAGAGAACAAACTCAATGAAAGATTTTGTAGCTTCATCAAGAGGTTCATCACCTGCCAAAGAGAGGGCAGGCTTAAGTCTCTCTTCGATGAAGGCTTTAGTGTTGCGTGAAAAGGAAGCCAAACTTACCTCTGAGTTCAGTAGTGATGAAAAAGTTCTGTATTTGATTAATTCATTGTTTGATCCAGAGGGAAGGTTCCTTAGAAGGAAGATCAACTCTGATCCAGAGGAAACTTCCATATCATCTTTGCCAAGAGATATTCATGGTGCTCCTCCTGAAAGCTTAGTTGCTAAGCTAGCTGAAGTAATTGGAAACTTCAAGACGCTCCAAGAAATGGCTCTTTTTTGGTGCAGGGTTGTTGCTGAACTGAGAAAACATTGGTCCAAAGAGAAATACTTACCTGGAGTCCCGCAAGATGACATTCCAGATCTGAAATATTGTCTTCTGTATCAAAAATTTCAAGTAATTAATTGTTGCATTTCTCGGAAAAGGCGCTATATTATTGCCACTGAATCACTAAATTCTATGATGGTGGAAGCCAATTTAAATACATTAGAACCAGCAAAGTACGCGGACAATATTCCTGCAATCCCTTTATTACATGCAAGGTTAAGAACTGGAGAGCTTGTTCTTCGACTTGGGGCTGATTGCCCATCTGGAGATCTGATGTTACTTGAAACAGGCGAGCCTGCATTCTCTCCTGTGACCCAGGAGGGACCCTTGCTTACAGAAGATTTGATCAAAGAGACAGAGGAGTTTGTGCTCCGGACAGGAAGTGTTGGTGCTGGATGCTCTCAACTCCTCTCTGACATGCAGGCTTTCAAGGCTGCAAATCCTGGTTGCATTTTGGAAGATTTTGTGAGATGGTACTCTCCGCCTGACTGGACTGAAAGTGAGGGAAGTACTGAGGATAAAGACTCTTCTTATTGTGGAGAGTCAATGTCTACCAAAGGTCAACTAAGTCTACGTATGCAAAAGGAAGGTAATTTGTGGCGTGAATTATGGGAAACGTCTAAACCAGTTCCAGCTGTTAAACAGGCACCTCTCTATGATGAGGATTTGGCAGTGGAGGGTATTCTAGATGCATTTGAAGACATCCCACCTTCGGAGCTTTTTGAACAACTGTTTGTTTCTCTTCTCGGTTCAGGATTTGCAATTGCTGAAAATATGCTATCTGGTGATCTTGACATTTCAAAATCGTTAAATGACTGCAAGGACTACATAGTTACCGCTTGTCAAAGCAACAGATTCGATGAGAAACTCGACGAGCTTATTCAGATGTATGAAATGGTGGAGAAAATGATGGTGAATCCAGACGAGGCAGTGAAGATAGTGAAGATGATGGAAGAATCAAGTATGAGTGGTAGTGTACCAAAACGGCGGATGTCTACTGGTGAACCAAAGCAGCGGTTAAAGCAACTTAGCCATATGTTTGGTGGCAAAGATAAAGCATCGAGCAAGTCTGTCTGGAAAGAAGAGGTAACCGATGAAATAAAACTGGTTCGACATTCTTTCTCAAGTTTCTTTGACAACAGCAAGTCATCTTTATTTTCAAAAAAGCCTCCTAAGCCTGGAAACCTATACCTTGTCGAAAGTGATTGGACAGTTATTTAG 1767 0.4228 MASAPFYDEHSYILNEQNDLIAKVEGLAAATEHPIPPSSVLKQLAIAFEAGKRTNSMKDFVASSRGSSPAKERAGLSLSSMKALVLREKEAKLTSEFSSDEKVLYLINSLFDPEGRFLRRKINSDPEETSISSLPRDIHGAPPESLVAKLAEVIGNFKTLQEMALFWCRVVAELRKHWSKEKYLPGVPQDDIPDLKYCLLYQKFQVINCCISRKRRYIIATESLNSMMVEANLNTLEPAKYADNIPAIPLLHARLRTGELVLRLGADCPSGDLMLLETGEPAFSPVTQEGPLLTEDLIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWYSPPDWTESEGSTEDKDSSYCGESMSTKGQLSLRMQKEGNLWRELWETSKPVPAVKQAPLYDEDLAVEGILDAFEDIPPSELFEQLFVSLLGSGFAIAENMLSGDLDISKSLNDCKDYIVTACQSNRFDEKLDELIQMYEMVEKMMVNPDEAVKIVKMMEESSMSGSVPKRRMSTGEPKQRLKQLSHMFGGKDKASSKSVWKEEVTDEIKLVRHSFSSFFDNSKSSLFSKKPPKPGNLYLVESDWTVI 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00804 588 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 32 576 IPR045700 GO:0005096|GO:0043547
Viun6g00804 588 MobiDBLite consensus disorder prediction 345 364 - -
Viun6g00804 588 Pfam Rab3 GTPase-activating protein catalytic subunit 263 415 IPR026147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00804 Viun-Chr6 17804780 17812021 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00804 K18270 - gmx:100800515 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g00804 6 17804780 17812021 Viun6g00804 6 17804780 17812021 ECH
Viun6g00804 6 17804780 17812021 Viun8g02830 8 36508635 36515604 PCT