Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02547 ATGAGCAAAAGCAACAACATAATGAGCTTAAGAGGAGTAACGTTGTGGTGTGTCTGGTTGTGTTTGTTGGAAGTATCAGTAGGAACTGTAAGGAAGTACAAGTTTGATGTGCAGTACATGTATGGTGAACCAGATTGCGTGGAGCAAGTTGTGATCGGAATCAATGGCCACTTTCCGGGCCCAACCATAACAGCAGAAGAAGGAGACACCCTTCATATTATTCTCACTAACAAGCTCTTCACAGAAGGAACAGTTCTTCACTGGCATGGAATAAGACAGTATGGAACGCCTTGGGCAGATGGAACTGCTTCCATTTCTCAGTGTGCTATTGCTCCAGGAGAATCTTTTCATTACAGATTCACAGTTGACAGGGCAGGTACGTACTTCTACCATGGACATTATGGTTTGCAAAGAACAGCAGGGTTGTATGGTTTTCTGATAGTGGATTTAGCAAAGGGAAAGAAAGAAGCATTTGGTTATGATGGTGAATTCAACCTTCTGTTGAGTGACTGGTGGCACAAAACCACACGAGAACAAGAGCTTGGTCTCTCCTCCATTCCATTCAGATGGGTCAATGAACCTCAATCTCTGCTTATGAATGGAAGAGGACAATACAATTGTTCTATGGCAGCTAATGTTATGAACACGTCCTTGCCACAGTGCAAGTTCAGAGGCAATGAAAAATGTGCACCTCAGATTTTTTATGTTCATCCAAACAAGACCTACAGAATTAGAATTGCTAGTACAACTTCCTTGGCTTCTCTCAACTTGGCTATTGGTAACCACAAATTGGTGGTGGTGGAAGCTGATGGAAACTACGTGAAACCATTTACTGTTGACGACATGGACATATATTCTGGTGAAACCTATTCAGTCCTCGTCACTACAAATCAAGATCCGAACAACAATTATTGGATTTCGATTGGTGTCAGAGGAAGAAAACCTAACACCCCACAAGGATTAACGATCCTAAACTACAAAACAAACCCTGCCACAGTTTTTCCCACTTCTCCACCACCAATCACACCTCAATGGGATGATTACAACCATAGCAAGACATTCACTTACAAAATTTTCAGCCTCAAGGGAACCGAAAAACCTCCGAAATACTATGATCGTAGGCTTCTCCTTCTCAACACACAAAACCTCGTTCGTGGTTACACTAAGTGGGCCATCAACAATGTCTCCTTGGCATTGCCATCAACCCCTTACCTAGGCTCTATCAAGTTTAACTTTAATGGCTCATTCGACACTAAAAACCCTCCAAACACGTTCTCAGAGGATTATGACATATACAACCCTCCCCTGAACCCTAATGCAAACACTGGTAGTGGGGTTTACATGTTCCAGTTAAACCAAGTGGTGGATGTGATACTGCAAAATGCTAATGTAATGAAGGGGAAAGGTAGTGAGATTCACCCTTGGCATTTGCATGGGCATGACTTTTGGGTTTTGGGGTATGGAGATGGGAGGTTTGAAGAGGGTGATGAGAGGAAATTCAACTTGAAGAACCCACCATTGAGGAACAATGTAGTGGTGTTCCCTTATGGTTGGACTGCTTTGAGGTTTAGGGCAGATAACCCTGGAGTTTGGCCCTTCCATTGTCACATTGAGCCTCATTTGTTCATGGGAATGGGTGTGATTTTTGCTGAGGCTCTTCTAAATGTTAAGAGAATACCTAGTGAGGCTCTCGCATGTGGCCTTCTTAGGAACATGTCAATAACTAAGAAACACAATTAG 1740 0.4287 MSKSNNIMSLRGVTLWCVWLCLLEVSVGTVRKYKFDVQYMYGEPDCVEQVVIGINGHFPGPTITAEEGDTLHIILTNKLFTEGTVLHWHGIRQYGTPWADGTASISQCAIAPGESFHYRFTVDRAGTYFYHGHYGLQRTAGLYGFLIVDLAKGKKEAFGYDGEFNLLLSDWWHKTTREQELGLSSIPFRWVNEPQSLLMNGRGQYNCSMAANVMNTSLPQCKFRGNEKCAPQIFYVHPNKTYRIRIASTTSLASLNLAIGNHKLVVVEADGNYVKPFTVDDMDIYSGETYSVLVTTNQDPNNNYWISIGVRGRKPNTPQGLTILNYKTNPATVFPTSPPPITPQWDDYNHSKTFTYKIFSLKGTEKPPKYYDRRLLLLNTQNLVRGYTKWAINNVSLALPSTPYLGSIKFNFNGSFDTKNPPNTFSEDYDIYNPPLNPNANTGSGVYMFQLNQVVDVILQNANVMKGKGSEIHPWHLHGHDFWVLGYGDGRFEEGDERKFNLKNPPLRNNVVVFPYGWTALRFRADNPGVWPFHCHIEPHLFMGMGVIFAEALLNVKRIPSEALACGLLRNMSITKKHN 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02547 579 ProSitePatterns Multicopper oxidases signature 2. 534 545 IPR002355 GO:0005507
Viun8g02547 579 FunFam L-ascorbate oxidase 365 577 - -
Viun8g02547 579 Pfam Multicopper oxidase 37 149 IPR011707 GO:0005507
Viun8g02547 579 Gene3D - 24 149 IPR008972 -
Viun8g02547 579 Pfam Multicopper oxidase 437 551 IPR011706 GO:0005507|GO:0016491
Viun8g02547 579 SUPERFAMILY Cupredoxins 370 560 IPR008972 -
Viun8g02547 579 Gene3D - 365 579 IPR008972 -
Viun8g02547 579 NCBIfam L-ascorbate oxidase 30 567 IPR017760 GO:0005507|GO:0005576
Viun8g02547 579 CDD CuRO_3_AAO 372 560 IPR034267 GO:0005507
Viun8g02547 579 SUPERFAMILY Cupredoxins 16 176 IPR008972 -
Viun8g02547 579 ProSitePatterns Multicopper oxidases signature 1. 529 549 IPR033138 -
Viun8g02547 579 Pfam Multicopper oxidase 164 328 IPR001117 -
Viun8g02547 579 PANTHER MULTI-COPPER OXIDASE 46 548 IPR045087 -
Viun8g02547 579 SUPERFAMILY Cupredoxins 158 361 IPR008972 -
Viun8g02547 579 FunFam L-ascorbate oxidase 158 364 - -
Viun8g02547 579 Gene3D - 158 364 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02547 Viun-Chr8 34846591 34850327 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02547 K00423 - gmx:102666289 987.638
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02547 8 34846591 34850327 Viun8g02547 8 34846591 34850327 ECH
Viun1g02596 1 36022705 36026147 Viun8g02547 8 34846591 34850327 ECH
Viun7g00165 7 1176174 1180573 Viun8g02547 8 34846591 34850327 ECH