Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02414 ATGACCGACACCCGGAAACTTGCCGCAGCCGGTTTCCCGGCGACGGCGACGTCGAGGGTGAAACCCGAGCCTGGTGTTGTACCCGGGTCAGGTCAGAACCCGGGGATTATAAGGTTTGGTTTGAGAGCTGAAATTGATACATCGCCGCCGTTTGCGTCTGTCAAGGAAGCGGTGACCCGTTTTGAAGGAACCGGACCTTGGACACCCTTTTACAAATTTGGAGAGCCTCGTAACAGTGCTGAAGAATTTGACATAAAGAGAGTGGAGGAAGAAGCAGCAAAGTTAGAAAAGGATTTGATAGTGAAAGAACTCGAAACACTTGATGTGCTTGAAGAACTGGGAGCTACCAAAGCTATTTTGGAGGAGTTGAAGCTGCAGCTACAATCAGAAGCATTGAATTGTTTAGCAAGTCGAGGTGAAAATTCATGTGAACAGGCTGGAGCTGCTACTAGAAATTGTGTGAATGGTATCAGCAATGAAGAGCAGACATCGCAAAGTTCGAGTCCTTCTGCACCATTACCTGATCTGTTCTTAGTGGAGTTACGACAAGCTAAAGTAAGTCTTGGTAAAACTATTAATGATCTTGGAGTGATACAATCCTCTGTTGAAGATTTAAATAAGAAAATGAAGAAGGAAAGGCTTTTTGTTGAGAGGGCACGAGAGAAGCTAGCATCGAAGTTTGCAGCTGCCTCTACTCAAGAAGTTACCAAAACAGAAGCAGGGTTTAATCCTCCTGAAGCTACTGTAGGAACAGGTTGCACATGTCACCATCCCCTTAACGGTGGGAGGAGTTTCGGATTTGATACTGGACAGTGCAATGGAAAGAGTGAAACAAGAAGCTCTGAAGTTTTAAGGTCCTTGCCTGAGTTTGGTGAGAATGGATTTAGTATTAAGACTGCTGAGATGAGGTGGTTTGCAGCTAAAAAGATGGAAGAAGCTGCAATGGCGGCAGAAGCTGTTGCTCTTGCTGAAATTGAGGCTCTATGTTGCCATGAGATATCTTCGGAATTTTCTCTTCCAGAACATCAGAAAGTGGCTTTTGCCTTAGGGGAGTGTTCTCCTTTAAATCCCGCAGTTCAATTTCCTCAAGAGTCAACCTTGAAGAAGGAAACAGAATCCAAGTTCCAAATTGACAAAATAGGCATTTCTAAACTGGGTATTTTGAAAAAGTTTGAGGAAGCAACAGAGGAAGTTCTACGCAGCAAACAAGTCTTGAATGAGGCATTGAATAGTGTTGAAAGTGCAAACATAAAGCAGCTTGCTGCTGAAGAGGCTCTTCGGAGATGGATTCCTGAGAATGATCTAAAAGGGCAGACATTGATTAAGAACAGCATGTTCAATCAAGCTGGAATTTGTCAAGATTCTCCTCTACCAGATGTAATTCGATCAATTACAAATAACAATGATCCGAAGCATGCCTTAAGGTCTTCAGTTTCAATGAGAGATGTACTTAGCAAAAAGCAAGTTCTTGAAGATTGTACTACAACAAAGGATATGCAAGAGCATTCTGAAAAGACAGTAGCACTGAGTCAAATGCTTCGAGCATTGAAGGAGGATCAAACTCTGCCGACAATACCCGAGAAAGATGTGAAGAGTAATCAAAAGCAAAAGCAGTTCATAGCATCTAGGAAAAAGTTCAGTTTCATCCAAATATCACTCCCCTTGGGAAAGCGAAGTAAGAAGAAGACATGA 1692 0.4291 MTDTRKLAAAGFPATATSRVKPEPGVVPGSGQNPGIIRFGLRAEIDTSPPFASVKEAVTRFEGTGPWTPFYKFGEPRNSAEEFDIKRVEEEAAKLEKDLIVKELETLDVLEELGATKAILEELKLQLQSEALNCLASRGENSCEQAGAATRNCVNGISNEEQTSQSSSPSAPLPDLFLVELRQAKVSLGKTINDLGVIQSSVEDLNKKMKKERLFVERAREKLASKFAAASTQEVTKTEAGFNPPEATVGTGCTCHHPLNGGRSFGFDTGQCNGKSETRSSEVLRSLPEFGENGFSIKTAEMRWFAAKKMEEAAMAAEAVALAEIEALCCHEISSEFSLPEHQKVAFALGECSPLNPAVQFPQESTLKKETESKFQIDKIGISKLGILKKFEEATEEVLRSKQVLNEALNSVESANIKQLAAEEALRRWIPENDLKGQTLIKNSMFNQAGICQDSPLPDVIRSITNNNDPKHALRSSVSMRDVLSKKQVLEDCTTTKDMQEHSEKTVALSQMLRALKEDQTLPTIPEKDVKSNQKQKQFIASRKKFSFIQISLPLGKRSKKKT 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02414 563 Coils Coil 110 130 - -
Viun8g02414 563 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 159 490 - -
Viun8g02414 563 Pfam Weak chloroplast movement under blue light 43 238 IPR008545 -
Viun8g02414 563 Pfam Weak chloroplast movement under blue light 179 433 IPR008545 -
Viun8g02414 563 Coils Coil 78 105 - -
Viun8g02414 563 Coils Coil 202 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02414 Viun-Chr8 33893140 33895625 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02414 - - gmx:100781281 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03292 1 40527196 40530425 Viun8g02414 8 33893140 33895625 ECH
Viun8g02414 8 33893140 33895625 Viun8g02414 8 33893140 33895625 ECH
Viun1g03292 1 40527196 40530425 Viun8g02414 8 33893140 33895625 PCT