Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03292 ATGGCAGAAACTCGAGACGCCGCCGCCGCCGCCGATGGGGTGCCCGGAACGCCCGCCATAAGGGAAGTCAGACCCGAGGCGGGGAGCCATGGCGGAATCGGGTCGTGCGGAATTCGGAGAGTGAATTTCCGAGCGGAGATTGACACGTCACCGCCGTTTGGGTCGGTTAAAGAGGCCGTGACCCGTTTTGGAGGTAGCGGGCCTTGGATACCGTTTTTTAACAGCATTGAAGATTTTGATATAAAGAAAGTGGAGGAACAGGCAGCAGAGTTGGAAAAGGATTTGATTGTGAAAGAACTTGAAACTCTTGACGTGCTGGAAGAACTGGGAGCTACTAAGAGAATTGTGGAGGACTTGAAGCAGCAATTGCAAAAAGAGGCTATGAAATGTTTTGCATCACGAGATGTAAATTCATATGAACAAGTTGGAACTCCCATTATTAAGGAAATGGATAAGGAAAATTGTGGAAACAATCTGAATAATCAAGAACAGATGATGCAAATTCCAAGCCCGTGCTCTATCATGTCATCATCACCTGATATGATCCTAATGGAGTTGAAGCAAGCCAAGTTGAATTTAGGCAAAACTATAAATGAACTTGGGGTTATACAATCCTCTGTTGAGTCTTTGAATAAGAAGATGAAGAAAGAGAAAATTTTTCTGGAGAGGACACGGGAAAAGCTAGCATCAAAGTTTGCAGCAGTTTCTGCTCTGGAGAGGGTCCAAGAGCAGACAAAACTAAATCCAGCAGCATCTCATGTAGAATGTGGCTCAGGTAACCCTACTAATACTGTAAGAAATCTCAATTCTGATTCCGGACAGTGCAATAGAATGGTTGAAACTAGAAGATCTGAACCTTCAAAACCCTTAAGTGTGTATGAAGAATATGGATTCAGTGTTAAGACTGCTGAGATGAGGTGGCTCGCTGCTAAAAAGATGGAAGAAGCTGCAAAAGCAGCAGAAGCTATTGCTCTTGCTGAAATCAAGGCTCTATCTAATGCTGACAGATCTTCAGGATATGTTCTGCCAGAGCCTGAGAAAGTCACTTTTGCTTTTGGAGATCGTTCTCCCCTAAACTCCAAGGCTCAGATACCAGAGGAGTCAACTTTGAAGAAGGTAATAGATGCAAGGTTTCAAATTGACGAAACAAAAGTTTCTAAACTGAGTATTTTGAAGAAGTTGGAGGAAGCAACCGAGGAAGTTCTACACAGCAAAAAAGTCTTGACAGATGCTTTAAACAGAGTTGAATCTGCAAACAAAAAGCAACATGCTGTTGAAGAGGCTCTGAGGAGATGGATTCCAGAGGATGATCTTAGAAGGTATAACACTATTTATTGTAACAAGCTTAATCATGGTGGAATCTGTGAAGATTCTGTGCATGATGATGTAACCAGGTCAACTCCAAAGGCAACATTAAGACCCACAATTTCTATGAGAGATGTACTTAGCAGAAAACAGGTTCCCGAAGGACATGCTACAAGAAAGGAAATGGAAGAGCACACTGAAAGACAAAAGGTGGCGTTAAGTCAAATGCTTGAAGCATTGAGGGAAGATCTAACTCTTCCAACAAAGCCTGAGAAAGATGGGAGCAATCAGAAGCAGTTCATGCCACAGAGGAAGAAATTTGGATTCATTCAAATATCACTCCCCCCATTGACAAAACCAAACAAGAAAAGGACATAA 1683 0.4272 MAETRDAAAAADGVPGTPAIREVRPEAGSHGGIGSCGIRRVNFRAEIDTSPPFGSVKEAVTRFGGSGPWIPFFNSIEDFDIKKVEEQAAELEKDLIVKELETLDVLEELGATKRIVEDLKQQLQKEAMKCFASRDVNSYEQVGTPIIKEMDKENCGNNLNNQEQMMQIPSPCSIMSSSPDMILMELKQAKLNLGKTINELGVIQSSVESLNKKMKKEKIFLERTREKLASKFAAVSALERVQEQTKLNPAASHVECGSGNPTNTVRNLNSDSGQCNRMVETRRSEPSKPLSVYEEYGFSVKTAEMRWLAAKKMEEAAKAAEAIALAEIKALSNADRSSGYVLPEPEKVTFAFGDRSPLNSKAQIPEESTLKKVIDARFQIDETKVSKLSILKKLEEATEEVLHSKKVLTDALNRVESANKKQHAVEEALRRWIPEDDLRRYNTIYCNKLNHGGICEDSVHDDVTRSTPKATLRPTISMRDVLSRKQVPEGHATRKEMEEHTERQKVALSQMLEALREDLTLPTKPEKDGSNQKQFMPQRKKFGFIQISLPPLTKPNKKRT 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03292 560 Coils Coil 81 101 - -
Viun1g03292 560 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 45 133 - -
Viun1g03292 560 Pfam Weak chloroplast movement under blue light 183 436 IPR008545 -
Viun1g03292 560 Pfam Weak chloroplast movement under blue light 45 128 IPR008545 -
Viun1g03292 560 MobiDBLite consensus disorder prediction 250 280 - -
Viun1g03292 560 Coils Coil 106 126 - -
Viun1g03292 560 Coils Coil 498 518 - -
Viun1g03292 560 MobiDBLite consensus disorder prediction 519 539 - -
Viun1g03292 560 MobiDBLite consensus disorder prediction 1 28 - -
Viun1g03292 560 Coils Coil 211 231 - -
Viun1g03292 560 MobiDBLite consensus disorder prediction 250 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03292 Viun-Chr1 40527196 40530425 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03292 - - gmx:100776514 870.152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03292 1 40527196 40530425 Viun8g02414 8 33893140 33895625 ECH
Viun1g03292 1 40527196 40530425 Viun1g03292 1 40527196 40530425 ECH
Viun1g03292 1 40527196 40530425 Viun8g02414 8 33893140 33895625 PCT