Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02367 ATGCCAATAACAATGACAAACTCTGAAGAACCCTCTCTTCCCAACCCTAACGATAACACTCAACACTCCACCAACGACGATGAAGAACCTCACCACCATCACGATATTGAAGAGGAAGAAGAAGAGGATGACGAATATGACGAAGACGTCATTCAGCAACCAAATCGCAGAATTCCCCAATCCGCAGCGTCCAAGCTGCGCGAACAGCGTTTCAAGGTGGAAACCCTAACGCGGCGGTTGTCGACGGAGCTGGTTTCGATCCGAGTGCACGACGTGGTCATAAACGGCAACACTAAGACTAAGGATTGGGTTATTGAGGCGGAGCTCAGAGGCATAGAGAACGCCACCAGCATGCAGGAGCTCGTGCAAGTTTCGCAAATCGCCATTTCCAGGTTACAGGACCTCGAAATCTTCGATTCCTGCACGGTTCGCCTCGAGGCTGGACCCCGAGAACTCCCAAACACGGCCAATGTCATAATCGACGTTGTCGAAACCGGTAACAAAGTTTCAGCCAAATTCAGCGTTTATAACAAACCCTCGACTAGTTCTTGGACAGCTGAAGGTGCTCTTAAGTATAAGAACTTCTTGGGCTATGGTGATCTATGGGATGCTTCTTTGGCCTATGGTGCCAACCAAGCGACTGAGGTGAGCATCGGGGTGCATGCCCCTCGAGTTAGAAGGTTTTTAACTCCTTTTGTGGCACGGCTGTCCATGCTTTCCCAAGATTGGCAAGAGACTTCCTCCTACAAAGATCATTTAGTGGGTGCATCTCTTGGATTGATCTCGACCAAGCACCATGACCTAGCATACACTCTTGGATGGCGTACCTTGGCAGATCCATCACAGATGTCATCCAGGTCTATAAGAAGGCAGCTTGGTCATGGTTTAGTGTCTTCTTTGAAGTATACATTTAAAATTGATAGGAGAAATTCTCCTATCAGGCCAACAAAAGGATATGCTTTTCTTTCGTCCACACATGTTGGTGGCCTCACTCCAGATCCCAGGAGCTTGCGGTTTCTGCGCCAGGAGTTTGGTGTTCGCTTTGCTGTCCCTTTTGGGTTTTACAATACAGCACTAAACCTTGGGATATCTGCTGGTGCTGTTTTTCCATGGGGACATGGATTCAAAACCAAGCCATCTCCCCTTCCAGAAAGGTTTTATTTGGGTGGTGATTTTTCTCCAGTTTGCACCCTAGGAGGGCCAACAACCTTATGGGGATTTAAAACTAGAGGATTAGGTCCTACTGAACCTCGGAGGCTAAGGCTAAATAGAGATGAATCTGATGATGACAGCAATGATTCCTCTGGATGGGACTTCATTGGCGGAGATCTTGCTGTTACTGCTTTTGCTGATCTCTCGTTTGATCTTCCAATTAGGTGGTTGAGAGAACATGGAATACATGGTCATGTTTTTGCTGGTTCTGGGAATGCTGCTAAATTAACTCAGAATGAATATAGGCACTTCTCTCCTCGGAAGTTCTTGGAATCCTTTCGAATGTCAGTGGGATGTGGATTTGTTATTCCTACTAACCTCTTCCGCCTAGAGGGTAACTACTTTTACATACTCAGAAAGAGTGAGCAAGATCGTGGGAAGACTGGATTTAGGTTTAGTTTCTCAGCTCCTTTGTAG 1629 0.4678 MPITMTNSEEPSLPNPNDNTQHSTNDDEEPHHHHDIEEEEEEDDEYDEDVIQQPNRRIPQSAASKLREQRFKVETLTRRLSTELVSIRVHDVVINGNTKTKDWVIEAELRGIENATSMQELVQVSQIAISRLQDLEIFDSCTVRLEAGPRELPNTANVIIDVVETGNKVSAKFSVYNKPSTSSWTAEGALKYKNFLGYGDLWDASLAYGANQATEVSIGVHAPRVRRFLTPFVARLSMLSQDWQETSSYKDHLVGASLGLISTKHHDLAYTLGWRTLADPSQMSSRSIRRQLGHGLVSSLKYTFKIDRRNSPIRPTKGYAFLSSTHVGGLTPDPRSLRFLRQEFGVRFAVPFGFYNTALNLGISAGAVFPWGHGFKTKPSPLPERFYLGGDFSPVCTLGGPTTLWGFKTRGLGPTEPRRLRLNRDESDDDSNDSSGWDFIGGDLAVTAFADLSFDLPIRWLREHGIHGHVFAGSGNAAKLTQNEYRHFSPRKFLESFRMSVGCGFVIPTNLFRLEGNYFYILRKSEQDRGKTGFRFSFSAPL 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02367 542 MobiDBLite consensus disorder prediction 1 21 - -
Viun8g02367 542 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 31 539 IPR039910 -
Viun8g02367 542 Pfam Omp85 superfamily domain 194 539 IPR000184 GO:0019867
Viun8g02367 542 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 179 540 - -
Viun8g02367 542 Pfam Surface antigen variable number repeat 87 164 IPR010827 GO:0019867
Viun8g02367 542 Gene3D membrane protein fhac 86 165 - -
Viun8g02367 542 MobiDBLite consensus disorder prediction 22 37 - -
Viun8g02367 542 FunFam Outer membrane OMP85 family protein 176 540 - -
Viun8g02367 542 MobiDBLite consensus disorder prediction 1 66 - -
Viun8g02367 542 FunFam Outer membrane OMP85 family protein 86 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02367 Viun-Chr8 33571238 33576683 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02367 K07277 - gmx:100802876 907.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02367 8 33571238 33576683 Viun8g02367 8 33571238 33576683 ECH
Viun1g03247 1 40220111 40224635 Viun8g02367 8 33571238 33576683 PCT