Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02306 ATGTTACCCCAGAAGCAAGGTGAAGAAACCATGATGTCGAGCCTGAATGAAACTGTTGAGCGTGAGGAGAGAGAGGACGAGAAGGTGGGTGGTTCACATTCCAGTTTGAGAAACCTTCTGTGGCACGGTGGATCTGTTTATGATGCATGGTTCAGCTGTGCTTCAAATCAGGTTGCGCAGGTTCTGCTAACACTGCCATACTCTTTTGCTCAGCTGGGAATGCTCTCTGGCGTCATATTCCAAGTCTTCTATGGAATAATGGGAAGTTGGACTGCTTATTTGATTAGCATTCTGTACATCGAGTACAGGAGCAGAAAAGAGAAAGAGAATGTCAGCTTCAAAAACCATGTCATTCAGTGGTTTGAAGTGCTGGAAGGTTTACTTGGTCCATACTGGAAAGCCATTGGCTTGGCCTTTAACTGCACTTTTCTTCTCTTCGGATCTGTCATCCAGCTTATAGCTTGTGCAAGTAACATATACTACATAAACGACCACTTGGATAAGAGGACCTGGACTTACATATTCGGAGCATGCTGTGCGACAACCGTGTTCATACCTTCGTTTCACAACTACAGGATTTGGTCTTTCCTTGGTCTTGGCATGACCACGTACACAGCCTGGTACTTAACCATTGCAGCCATTGTTCATGGTCAGGTTGAAAATGTGACTCACACGGGCCCCAAAAAATTGGTTTTGTATTTCACGGGAGCCACCAACATTCTCTACACTTTCGGCGGGCACGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAACCTCAAAAGTTCAAATATATCTATCTTTATGCCACTCTTTTTGTATTCACACTCACCCTACCATCTGCCATTGCCGTTTACTGGGCCTTCGGTGACCAACTCTTGGACCACTCCAATGCCTTCTCTCTTCTCCCTCGCTCTGGCTGGCGTGACACTGGTGTCATCTTAATGCTGATTCACCAGTTTATCACTTTTGGATTTGCTTGCACACCATTGTATTTTGTGTGGGAGAAAGTGATAGGAATGCATGACACAAAGAGCATATGTTTGAGGGCACTTGCAAGGTTACCTGTGGTGATACCAATTTGGTTTTTAGCTATTATTTTCCCTTTCTTTGGCCCTATAAACTCTGCTGTGGGGGCTCTCTTGGTTACCTTTACCGTCTATATCATCCCTGCTTCAGCTCACATGCTTACTTACAGGTCTGCTTCTGCACGACAGAATGCTGCTGAGAAATTGCCCTTCTTCATCCCAAGCTGGACGTTAATGTATGTGATCAATGCATTTGTGGTGGTGTGGGTTCTTGTGGTGGGATTTGGATTTGGAGGGTGGGCTAGCATGGCAAACTTCATCAAACAGGTTGACACATTTGGACTCTTTGCCAAGTGCTACCAGTGTCCCCCGCATAAAACACCAGCTTCCAACCAAACACTGCATCACTGA 1440 0.4562 MLPQKQGEETMMSSLNETVEREEREDEKVGGSHSSLRNLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFAQLGMLSGVIFQVFYGIMGSWTAYLISILYIEYRSRKEKENVSFKNHVIQWFEVLEGLLGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAIVHGQVENVTHTGPKKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLYATLFVFTLTLPSAIAVYWAFGDQLLDHSNAFSLLPRSGWRDTGVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVTFTVYIIPASAHMLTYRSASARQNAAEKLPFFIPSWTLMYVINAFVVVWVLVVGFGFGGWASMANFIKQVDTFGLFAKCYQCPPHKTPASNQTLHH 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02306 479 PANTHER OS05G0424000 PROTEIN-RELATED 48 426 - -
Viun8g02306 479 Coils Coil 5 25 - -
Viun8g02306 479 MobiDBLite consensus disorder prediction 1 30 - -
Viun8g02306 479 MobiDBLite consensus disorder prediction 15 30 - -
Viun8g02306 479 Pfam Transmembrane amino acid transporter protein 42 435 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02306 Viun-Chr8 33056579 33061370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02306 22 465 Organic Solute Cotransporters AT2G21050 79.505 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02306 K13946 - gmx:100817572 909.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03189 1 39870466 39874014 Viun8g02306 8 33056579 33061370 ECH
Viun8g02306 8 33056579 33061370 Viun8g02306 8 33056579 33061370 ECH
Viun1g03189 1 39870466 39874014 Viun8g02306 8 33056579 33061370 PCT