Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03189 ATGTCGCGTCAGAAGCAAGGTGAAGAAGCCATGATGTCGAGTCTCACCCAAGCGGTTGAGCGTGAAGAGGGAGAGGAGGTCAAAGGGGAGACGCCACATTTTACCTTAAGAAATGCTCTCTGGCATGGTGGTTCTGCCTATGATGCTTGGTTCAGCTGTGCCTCAAATCAGGTTGCCCAGGTTCTGTTGACTCTGCCTTACTCTTTCGCACAGCTGGGTGTGGTTTCAGGCGTTATATTCCAGGTGTTCTATGGGTTGCTGGGGAGTTATACTGCTTATTTAATCAGTATTCTGTACATTGAGTACAGAAGCCGGAAAGAGAAAGAGAATGTCAGCTTCAAAAACCATGTCATCCAGTGGTTTGAAGTGTTGGAAGGCTTACTGGGTCCATACTGGAAAGCCATAGGATTGGCCTTCAATTGCACTTTTCTCCTCTTTGGATCTGTTATCCAGCTCATTGCTTGTGCCAGTAATATATACTACATCAATGATCACTTGGACAAAAGGACTTGGACCTACATATTTGGGGCTTGTTGTGCCACCACAGTGTTCATTCCATCATTTCACAACTACAGGATATGGTCCTTCCTTGGTCTTGGCATGACCACCTACACTGCTTGGTATTTGACCATTGCATCACTTGTTCATGGCCGGGTTGAAAATGTGACACATTCGGGCCCAAAAAAGTTGGTTTTGTATTTCACAGGCGCCACCAACATACTCTACACTTTCGGCGGGCACGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAGCCTCAGAAGTTCAAGTATATATATCTGTATGCAACATTTTATGTGTTCACTCTCACTATCCCCTCTGCTGTTTCCGTTTACTGGGCCTTCGGTGACCAACTTTTGGATCATTCCAATGCTTTCTCACTTCTCCCTCGTAGTGGCTGGCGTGACGCCGGTGTCATCCTAATGCTCATTCACCAGATTATCACATTTGGGTTTGCTTGTACGCCATTGTATTTTGTGTGGGAGAAAGTGATAGGAATGCATGACACAAAGAGCATATGCTTGAGGGCTGTAGCCAGGTTACCTGTGGTGATACCAATATGGTTTTTGGCTATTATTTTCCCTTTCTTTGGGCCCATTAATTCAGCTGTGGGGGCCCTTTTGGTCAGCTTCACCGTTTACATCATTCCCGCTTCGGCCCATATGCTCACTTTCAGATCTGCCACCGCAAGACAGAATGCTGCAGAGAAATTGCCGTTCTTCATTCGAAACTGGACGATGATGTACGTGGTGAATGCATTGGTGGTGGTGTGGGTTCTGGTGGTGGGCTTTGGGTTTGGAGGATGGGCCAGCATGGTTAATTTCATCAGACAGGTCGACACATTTGGACTATTTGCTAAGTGCTACCAGTGCCCGCCCAAATTCACCAACCACACCCTGCATCACTCATAA 1434 0.4679 MSRQKQGEEAMMSSLTQAVEREEGEEVKGETPHFTLRNALWHGGSAYDAWFSCASNQVAQVLLTLPYSFAQLGVVSGVIFQVFYGLLGSYTAYLISILYIEYRSRKEKENVSFKNHVIQWFEVLEGLLGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIASLVHGRVENVTHSGPKKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLYATFYVFTLTIPSAVSVYWAFGDQLLDHSNAFSLLPRSGWRDAGVILMLIHQIITFGFACTPLYFVWEKVIGMHDTKSICLRAVARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPASAHMLTFRSATARQNAAEKLPFFIRNWTMMYVVNALVVVWVLVVGFGFGGWASMVNFIRQVDTFGLFAKCYQCPPKFTNHTLHHS 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03189 477 PANTHER OS05G0424000 PROTEIN-RELATED 48 426 - -
Viun1g03189 477 MobiDBLite consensus disorder prediction 1 27 - -
Viun1g03189 477 Pfam Transmembrane amino acid transporter protein 42 435 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03189 Viun-Chr1 39870466 39874014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03189 4 465 Organic Solute Cotransporters AT2G21050 75.108 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03189 K13946 - gmx:100795466 889.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03189 1 39870466 39874014 Viun1g03189 1 39870466 39874014 ECH
Viun1g03189 1 39870466 39874014 Viun8g02306 8 33056579 33061370 ECH
Viun1g03189 1 39870466 39874014 Viun8g02306 8 33056579 33061370 PCT