Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02303 ATGGTTGATCTAGATTGGCAAACAAAAATGGTTTGTTCCAACTCACCCAAACTCTCTCTCTTAGAGAACAACATCCCAATCCCCACTTTGCAAATTCCCCTTCGCCAAAACGACATCACCGCTGCGTCGTCTCCGCTATGTGCTGCCTACGACAACTACCTTCGCCTCCCCGACCTAAGAAACCTCTGGGCCACCACCAACTTCCCCGATTGGCCCAACGAGCCCATCATAAAGCCCGCCTTACACGCCCTCGAAATCACCTTCCGCTTTCTCGCAACCGTTTTATCAGACCCGAGGCCCTACGTTAACAAGCGCGAGTGGACCCGACGCCTAGAGTCCCTCGCCGCGGCTCAGGTCCAGATCATTGCCGTGCTCTGCGAAGACGAGGAGCAAAACCCCGAGACACGTGGCACGGCACCCGTGAGTGACGTCAACGACTTCGTCACGGCTCAGAGAAGAAGCTACAGCGAGGAGAGCCTGCTCCCGCGTCTCGCCACGTGGCACAGATCCAGGGACGTGGCGAGGAGGATCCTCGCCACCGTGGAATGCGAGATGATGAGGTGCACGTACACGCTGGGTCTGGGAGAGGCCAACCTCGCGGGAAAAAAGGTTCTCCGCTACGACGACGTTTGCAGGCCGACCGAGATCCGATCCCTGGAGACCACGCCGTACGATCACGTGGAGAACTACGAGAACGGGACGGTGCACGCGGCGCAGCAGATCGTGGAGTGCTGGACGCGTGCGGGGAGGGGGTTGGTGGAGAGATTGGTGGAGTCGGTGGAGAGGAGAGAGTTGGAGAAGGCGGCGAGTGAGTGCCACGCTGTGGAACGGATCTGGAAACTCCTGGCGGAGGTTGAGGACGTGCATGAGATGATGGATCCGGAGGATTTTCTCCGGCTGAAGAAGGAATTGGGGATGAGAAGGCAAGGCGAAACGGAGGCGTTTTGCTTTAGGTCGAAGGAGGTTGTGGAGTTGGCGAAGGTGTGTAGGGATCTGAGGCAGAAGGTGCCGGAGATATTGGAGGTGGAGGTTGACCCGAAGGGTGGGCCGGGGATGATGGAGGCGGCGATGAAGGTGTACCGGGAAAAAACGAAGGGGTTGGAGAAGGTTGTTGTTTTGCAGGGTATGCAAGCGATTGAGGTGGCGATGAAGAGGTTCTTCTTCGCTTACAAGCAGGTTGCGTCGCTTCTCATGGGAAGCTCCGAGGCCGATGGGTTAACTCAGATATTCCTTCAACCCACCTATTTCCCTAGCTTGGATGCTGCCAAGACATTCCTCAGTTATTACTGGGAAAATAACGCCAATCAAACTCAAAACTTGGTAGTTCCTTGGTAG 1335 0.564 MVDLDWQTKMVCSNSPKLSLLENNIPIPTLQIPLRQNDITAASSPLCAAYDNYLRLPDLRNLWATTNFPDWPNEPIIKPALHALEITFRFLATVLSDPRPYVNKREWTRRLESLAAAQVQIIAVLCEDEEQNPETRGTAPVSDVNDFVTAQRRSYSEESLLPRLATWHRSRDVARRILATVECEMMRCTYTLGLGEANLAGKKVLRYDDVCRPTEIRSLETTPYDHVENYENGTVHAAQQIVECWTRAGRGLVERLVESVERRELEKAASECHAVERIWKLLAEVEDVHEMMDPEDFLRLKKELGMRRQGETEAFCFRSKEVVELAKVCRDLRQKVPEILEVEVDPKGGPGMMEAAMKVYREKTKGLEKVVVLQGMQAIEVAMKRFFFAYKQVASLLMGSSEADGLTQIFLQPTYFPSLDAAKTFLSYYWENNANQTQNLVVPW 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02303 444 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 438 IPR038759 -
Viun8g02303 444 Pfam Hs1pro-1 protein C-terminus 185 432 IPR009743 -
Viun8g02303 444 Gene3D - 205 325 - -
Viun8g02303 444 Pfam Hs1pro-1 N-terminus 1 182 IPR009869 GO:0006952
Viun8g02303 444 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 207 426 IPR037217 GO:0019441|GO:0020037|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02303 Viun-Chr8 33019456 33021119 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02303 - - gmx:100778560 679.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02303 8 33019456 33021119 Viun8g02303 8 33019456 33021119 ECH
Viun1g03187 1 39846192 39848061 Viun8g02303 8 33019456 33021119 PCT