Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03187 ATGGTTGATTTACATTGGAAATCAAAGATGCCTGCTTCCGACATGTCTTCCAAATCTCCAAAACTCTCCATCCCCGCCAAGTCCTTACCCTCTCTGCAACTACCCTTCCGCACCACAGACATCTCTCACGCTGCACCCGCACTCTGTGCTGCATACGATTACTATCTCTCTCTCCCACAACTCAGAACCCTTTGGAATTCAAGAGACTTTCCCGATTGGAACAACGAACCAATTTTAAAACCGGCCTTGCAAGCTTTAGAAGTCACCTTCCGTTTTCTTTCCATTGTTTTCTCCGATCCCAGGCCTCATTCCAACCGCAGAGAATGGTACCGTAGCATAGAATCCCTCGCCATTCATCAGATTGAGATCATAGCCATGCTGTGTGAGGACGAGGAGCTCAATCCTCAGACACGTGGCGGCGTCCCAACCGCTGATCTCACTGTAGATACCACCAACAACGAGAGCCGGAGCTACAGCGAGGCCAGCCTTCTTCCGCGGCTTGCCACGTGGTACAAATCCAAGGACGTGGCGCAGAGGATTCTTCTCACCGTGGAGTGCCAAATGAGGAGGTGTAGCTATACGCTAGGTTTGGGAGAGCCGAACCTGGCGGGGAAACCGAGCCTGCTTTACGACCGCGTCTGCAGACCGAGTGAAATCCACGCGCTCAAGACTACGCCTTACGACGAACGTGTGGAGAACTACGAGAACCACGCTGTGCACGCCACGCACCAGATCGCGGAGTCGTGGATCCACACATCGCGGATGCTTCTGGAGAGGATCACCGACGCTATCCTCTCCAAGAGGTTGGAGCAGGCGGCGGAGGACTGCCACGCGGTGGAGCGCATCTGGAAGCTTCTCGCGGAGGTGGAAGATCTCCACCTCATGATGGATCCGGACGAATTCCTGCGTTTGAAGAACCAGCTCTCGGTGCGCTCGTCGAGCGGCGAAACGGCGTCTTTCTGCTTCAGATCAAAGGAATTGGTGGAACTGACGAAAATGTGCAGAGATCTGAGGCACAGGGTGCCGGAGATATTGGAGGTGGAGGTGGATCCGAAGGGAGGACCGAGGATTCAAGAAGCGGCGATGAAACTGTACGTCTCGAAGAGCTCGTTCGAGAAGGTTCACCTGTTGCAGGCGATGCAGGCGATTGAGGCGGCGATGAAGAGGTTCTTCTACGCGTATAAACAAGTTCTGACGGTGGTGATGGGAAGCTCGGAGGCTAACGGCAACCGAGTTGGGCTGAGTTGCGACTCGTGTGACTCGTTGACTCAGATATTCCTTGAACCGACGTATTTTCCAAGCTTGGATGCCGCCAAAACTTTCCTTGGGTACCTCTGGGATAATAACGATCACAAGTGGCCATGA 1365 0.5385 MVDLHWKSKMPASDMSSKSPKLSIPAKSLPSLQLPFRTTDISHAAPALCAAYDYYLSLPQLRTLWNSRDFPDWNNEPILKPALQALEVTFRFLSIVFSDPRPHSNRREWYRSIESLAIHQIEIIAMLCEDEELNPQTRGGVPTADLTVDTTNNESRSYSEASLLPRLATWYKSKDVAQRILLTVECQMRRCSYTLGLGEPNLAGKPSLLYDRVCRPSEIHALKTTPYDERVENYENHAVHATHQIAESWIHTSRMLLERITDAILSKRLEQAAEDCHAVERIWKLLAEVEDLHLMMDPDEFLRLKNQLSVRSSSGETASFCFRSKELVELTKMCRDLRHRVPEILEVEVDPKGGPRIQEAAMKLYVSKSSFEKVHLLQAMQAIEAAMKRFFYAYKQVLTVVMGSSEANGNRVGLSCDSCDSLTQIFLEPTYFPSLDAAKTFLGYLWDNNDHKWP 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03187 454 Gene3D - 208 342 - -
Viun1g03187 454 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 451 IPR038759 -
Viun1g03187 454 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 210 442 IPR037217 GO:0019441|GO:0020037|GO:0046872
Viun1g03187 454 Pfam Hs1pro-1 N-terminus 1 185 IPR009869 GO:0006952
Viun1g03187 454 MobiDBLite consensus disorder prediction 1 22 - -
Viun1g03187 454 Pfam Hs1pro-1 protein C-terminus 188 448 IPR009743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03187 Viun-Chr1 39846192 39848061 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03187 - - gmx:547603 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03187 1 39846192 39848061 Viun1g03187 1 39846192 39848061 ECH
Viun1g03187 1 39846192 39848061 Viun8g02303 8 33019456 33021119 PCT