Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02278 ATGAAGGGTGGGAGCCGTTTCTTCACCATAGCTCTGGTCTCCGCCTGGTACGCCACCAACATTGGGGTTTTGCTCCTCAACAAGTATCTTCTCAGTAACTATGGCTTCAAGTACCCTATATTCCTCACCATGTGCCACATGACCGCTTGCTCCCTCTTCAGTTACATCGCCATCGCCTGGCTAAAGCTCGTTCCCATGCAGACCATACGATCCCGCCTCCAGTTCCTCAAGATCGCCGCTCTCAGCCTCGTCTTCTGCGTCTCCGTCGTCTTCGGCAACGTCTCCCTCCGCTACCTCCCCGTCTCCTTCAACCAGGCCATCGGCGCCACCACCCCCTTCTTCACCGCCGTCTTCGCCTATCTCATCACCTTCAAGAGAGAGGCCTGGCTCACCTACCTCACCCTCGTCCCCGTTGTCGCCGGCGTCGTCATTGCCAGCGGGGGTGAACCGAGCTTCCATTTATTTGGATTCATAGTATGTATTGCAGCTACAGCTGCACGAGCCTTAAAATCCGTGTTGCAAGGAATTTTACTTTCTTCTGAAGGAGAGAAGCTGAATTCTATGAACCTTCTTCTTTACATGGCTCCAATTGCTGTTGTTTTCCTTCTCCCTGCTACACTAATAATGGAAGAAAATGTGATTGGCATTACATTGGCTCTTGCCAGAGATGATGTGAAGATCATTTGGTATCTGCTATTTAATTCAGCACTTGCTTATCTTGTCAACCTGACCAATTTCTTGGTCACCAAACATACCAGTGCTCTTACCCTGCAGGTACTTGGGAATGCTAAAGGTGCTGTAGCAGTAGTAGTTTCAATTCTGATATTTAGAAACCCAGTGTCAGTCACTGGAATGATGGGTTATTCATTCACAGTCCTTGGAGTAGTTCTTTATAGTGAAGCCAAAAAGCGAAGCAAGTGA 921 0.4886 MKGGSRFFTIALVSAWYATNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLFSYIAIAWLKLVPMQTIRSRLQFLKIAALSLVFCVSVVFGNVSLRYLPVSFNQAIGATTPFFTAVFAYLITFKREAWLTYLTLVPVVAGVVIASGGEPSFHLFGFIVCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVFLLPATLIMEENVIGITLALARDDVKIIWYLLFNSALAYLVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMMGYSFTVLGVVLYSEAKKRSK 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02278 306 SUPERFAMILY Multidrug resistance efflux transporter EmrE 196 300 - -
Viun8g02278 306 Pfam Triose-phosphate Transporter family 11 299 IPR004853 -
Viun8g02278 306 PANTHER SOLUTE CARRIER FAMILY 35 11 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02278 Viun-Chr8 32850138 32853692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02278 3 306 Organic Solute Cotransporters AT3G11320 90.132 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02278 - - gmx:100806704 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03155 1 39699511 39706649 Viun8g02278 8 32850138 32853692 ECH
Viun8g02278 8 32850138 32853692 Viun8g02278 8 32850138 32853692 ECH
Viun1g03155 1 39699511 39706649 Viun8g02278 8 32850138 32853692 PCT