Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03155 ATGGCTCAAATTGCTCTTATTGCTCCACCAACTTTCATAGCTATCACCACCGGTAGGGGAAAACATGAACTCTCATATGCAAGAAAGAAGGTGAATTTAGCATCAGTTGTTCCGAGTAGGAAGATGGAGAAGGCTTCATTGTTTGTTTCTTCAAATTCCGGTGGTGAAAGGAGTAGAAGTGTGGCGGTGAAAGTTTCAGAAGGAGGAGCCATCTCTCTCCCTCAACCTTGGCCACCACAAAAGGGCTCTGAAGATCAAATCGAAGGCATCAACAGAATGAAGGGTTCCAACCGGTTCTTCACTGTAGCGCTGGTGGCGGCGTGGTACTCCTCCAACATTGGGGTGCTTCTCTTGAATAAGTATTTGCTCAGCAACTATGGGTTCAAGTACCCGATCTTCCTCACCATGTGCCACATGACGGCGTGTTCCTTGCTCAGTTACGTGGCTATCGCGTGGATGAAGCTAGTGCCGTTGCAAACCATTCGATCCAGGGTTCAGTTCTTCAAGATCTCTGCTCTCAGTCTAGTTTTCTGTGTCTCCGTTGTGTTTGGGAACATTTCTCTGCGCTACCTCCCCGTATCGTTTAACCAGGCTATTGGCGCCACCACGCCCTTCTTCACTGCCGTTTTTGCTTACCTTATGACCTTCAAGAGAGAGGCTTGGCTTACTTACCTCACCCTTGTTCCTGTTGTTACTGGAGTCATCATTGCCAGTGGGGGGGAACCTAGTTTCCATCTGTTTGGATTTATTATATGTGTTGCGGCTACAGGCGCAAGGGCTCTGAAATCAGTGCTACAAGGGATTTTGCTTTCTTCTGAAGGAGAGAAGCTGAATTCTATGAACCTTTTGCTTTACATGGCTCCAACGGCTGTGGTTTTCCTTCTTCCTGCAACACTTATAATGGAAGAGAATGTGGTTGGCATCACGTTGGCTCTTGCTAGAGATGATTCCAAGATCATTTGGTATCTGCTGTTTAATTCGGCACTTGCATATTTTGTCAACCTGACCAACTTTTTGGTCACGAAACATACCAGTGCTCTGACCCTTCAGGTTCTAGGAAATGCTAAAGGAGCTGTAGCAGTAGTAGTTTCAATTCTAATCTTCAGAAACCCAGTTTCGGTCACTGGAATGATGGGTTACTCACTCACAGTGTTTGGAGTTATACTCTATAGTGAAGCCAAAAAGCGAAGCAAGTGA 1197 0.4612 MAQIALIAPPTFIAITTGRGKHELSYARKKVNLASVVPSRKMEKASLFVSSNSGGERSRSVAVKVSEGGAISLPQPWPPQKGSEDQIEGINRMKGSNRFFTVALVAAWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAWMKLVPLQTIRSRVQFFKISALSLVFCVSVVFGNISLRYLPVSFNQAIGATTPFFTAVFAYLMTFKREAWLTYLTLVPVVTGVIIASGGEPSFHLFGFIICVAATGARALKSVLQGILLSSEGEKLNSMNLLLYMAPTAVVFLLPATLIMEENVVGITLALARDDSKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMMGYSLTVFGVILYSEAKKRSK 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03155 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 290 392 - -
Viun1g03155 398 PANTHER SOLUTE CARRIER FAMILY 35 102 395 - -
Viun1g03155 398 Pfam Triose-phosphate Transporter family 103 391 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03155 Viun-Chr1 39699511 39706649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03155 92 398 Organic Solute Cotransporters AT3G11320 90.554 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03155 - - vra:106757848 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03155 1 39699511 39706649 Viun8g02278 8 32850138 32853692 ECH
Viun1g03155 1 39699511 39706649 Viun1g03155 1 39699511 39706649 ECH
Viun1g03155 1 39699511 39706649 Viun8g02278 8 32850138 32853692 PCT