Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02272 ATGGTGCCCTTGGGTTGGGTGTGGGGTGTGATTGGTTTGATTCTCGCCACTGCGATTTCGCTCTACGCCAACTCTCTTATTGCTAGGCTTCATGAATATGGAGGAACAAGGCATATTCGATACAGAGATCTTGCTGGATTTATATATGGGAGAAAAGCTTATTCTCTCACATGGACTCTGCAGTATGTCAATCTTTTCATGATAAATGTTGGCTACATCATTTTGGCTGGTTCCGCTTTGAAGGCTGCTTATGTTCTATTTAGGAATGACGATGGGATGAAGCTTCCTTATTTTATCGCCATAGCTGGATTGGTCTGTGCGATGTTTGCCATTTGTATTCCCCATTTATCGGCTCTTGGAACTTGGCTGGGATTTTCAACAGTCTTGAGCCTGGTGTACATTGTTATAGCATTTGTTCTGTCGATTAAAGATGGTATAAAATCACCACCTCGTGATTATAGTATTGCGGGGACACCGACAAGTAAAATATTCACAACAATTGGAGCATCTGCGAATCTTGTGTTCGCATATAATACAGGAATGCTTCCTGAGATACAGGCAACCATCAAGCAGCCAGTTGTGAAGAACATGATGAAAGCTTTGTACTTTCAGTTTACCGTTGGAGTTTTGCCGTTATATATGGTAACATTTGGAGGATACTGGGCTTACGGATCTTCAACACCAACCTATTTGATGGCTGGTGTAAATGGTCCGGTCTGGGCTAAGGCCATGGCCAATATTGCAGCTTTTCTTCAATCAGTCATTGCATTGCATATATTTGCTAGTCCAATGTACGAGTATTTGGATACGAAACATGGGATCAAAGGGAGTGCTCTGGCTTTTAAGAACTTGTCATTTCGAATCATGGTGAGAGGTGGGTACCTGGCTATAAATACGTTTGTATCAGCTGTGTTGCCATTTCTTGGAGATTTCATGAGCCTGACCGGAGCAATCAGCACCTTTCCCCTTACGTTTATCCTTGCAAATCATATGTACCTGGTGGCACAGAAAAACAAACTAACGTCCATCCAGAAGCTCTGGCATTGGATCAATATTTGTTTCTTTGCGATCATGTCTGCTGCGGCAACTGTTGCAGCACTTAGGCTTATTGCTTTAGACTCCAAAACGTACCATCCTTTTGCAGATATATGA 1152 0.4253 MVPLGWVWGVIGLILATAISLYANSLIARLHEYGGTRHIRYRDLAGFIYGRKAYSLTWTLQYVNLFMINVGYIILAGSALKAAYVLFRNDDGMKLPYFIAIAGLVCAMFAICIPHLSALGTWLGFSTVLSLVYIVIAFVLSIKDGIKSPPRDYSIAGTPTSKIFTTIGASANLVFAYNTGMLPEIQATIKQPVVKNMMKALYFQFTVGVLPLYMVTFGGYWAYGSSTPTYLMAGVNGPVWAKAMANIAAFLQSVIALHIFASPMYEYLDTKHGIKGSALAFKNLSFRIMVRGGYLAINTFVSAVLPFLGDFMSLTGAISTFPLTFILANHMYLVAQKNKLTSIQKLWHWINICFFAIMSAAATVAALRLIALDSKTYHPFADI 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02272 383 Pfam Transmembrane amino acid transporter protein 1 362 IPR013057 -
Viun8g02272 383 PANTHER OS05G0424000 PROTEIN-RELATED 1 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02272 Viun-Chr8 32825865 32828342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02272 1 383 Organic Solute Cotransporters AT2G39890 74.935 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02272 K26247 - gmx:100500168 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02272 8 32825865 32828342 Viun8g02272 8 32825865 32828342 ECH
Viun1g03153 1 39689734 39695415 Viun8g02272 8 32825865 32828342 PCT