Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03153 ATGGGAAGAGGAGACATTGAACTCGAACCAAACAAGGTCTATGACCACCATGGTGCACCAGACGTTGAAGTTCCAAGTACCGCTCATCAAATTAGCAGCGATTCATGGTTTCAAGTGGGTTTTATCCTCACGACTGGAATCAACAGTGCCTATGTGCTTGGATATTCAGGGACTGTTATGGTTCCATTGGGATGGATTGGAGGTGTGGTTGGTCTAGTTCTTGCTACCATAATATCACTCTATGCAAATGCTTTAATTGCTCAACTCCATGAACATGGAGGACAAAGGCATATTAGGTATAGAGATCTTGCTGGATTTGTGTATGGTAAGAAGGCCTATTCTCTCACATGGGCTCTGCAGTATGTCAATCTTTTTATGATAAATACTGGCTACATCATTTTGGCCGGTTCAGCCTTGAAAGCTACTTATGTTCTATTCAGGGATGATGGTCTATTGAAACTTCCTTATTGTATTGCCATAGCTGGACTCGTGTGTGCAATGTTTGCCATCTGCATTCCTCATCTTTCAGCTCTCGGAATTTGGCTTGGATTTTCAACTATCTTCAGTCTAGTATACATTATCATAGCATTTTTGTTGTCGCTTAAGGATGGATTACACTCACCGCCTCGTGATTACAACCTTCTAGGAGATGGTTTCAGCAAAGTATTCACCATAATTGGGGCATCTGCAAACCTTGTGTTTGCATTTAATACAGGCATGCTTCCTGAGATACAGGCAACAATTAGGCAGCCAGTTGTGAAGAACATGATGAGGGCACTGTACTTTCAGTTTACTGTTGGAGTTTTACCGTTGTACCTAGTTACGTTTACAGGATATTGGGCTTATGGATCCAAGACATCGGTGTATTTGCTTAACAGTGTAAATGGTCCAGTTTGGGTGAAGGCTTTTGCCAATATTACAGCCTTTCTTCAATCGGTCATCGCATTGCATATCTTTGCAAGTCCAATGTATGAGTTTTTGGATACTAAATATGGGATCAAAGGAAGCGCACTGAATGTTAAAAACATGTCATTTCGAATCGTGGTAAGAGGTGGTTACCTGGCTTTTAACACATTTGTGTCGGCTTTCTTGCCATTCCTTGGAGATTTCATGAGTCTAACGGGGGCGATAAGCACATTTCCCCTTACATTTATTCTTGCAAACCATATGTACCTTAAGGCAAAGAAGGACAAACTAACAACCTCGCAAAAGCTCTGGCACTGGTTAAACATTGGTTTCTTTTCCATCATGTCTTTTGTAGCCACAATTGCTGCCATACGACTTATTGCTGTAGACTCCAAAAATTACCATGTTTTTGCTGATGTGTGA 1329 0.4131 MGRGDIELEPNKVYDHHGAPDVEVPSTAHQISSDSWFQVGFILTTGINSAYVLGYSGTVMVPLGWIGGVVGLVLATIISLYANALIAQLHEHGGQRHIRYRDLAGFVYGKKAYSLTWALQYVNLFMINTGYIILAGSALKATYVLFRDDGLLKLPYCIAIAGLVCAMFAICIPHLSALGIWLGFSTIFSLVYIIIAFLLSLKDGLHSPPRDYNLLGDGFSKVFTIIGASANLVFAFNTGMLPEIQATIRQPVVKNMMRALYFQFTVGVLPLYLVTFTGYWAYGSKTSVYLLNSVNGPVWVKAFANITAFLQSVIALHIFASPMYEFLDTKYGIKGSALNVKNMSFRIVVRGGYLAFNTFVSAFLPFLGDFMSLTGAISTFPLTFILANHMYLKAKKDKLTTSQKLWHWLNIGFFSIMSFVATIAAIRLIAVDSKNYHVFADV 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03153 442 Pfam Transmembrane amino acid transporter protein 34 426 IPR013057 -
Viun1g03153 442 PANTHER OS05G0424000 PROTEIN-RELATED 31 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03153 Viun-Chr1 39689734 39695415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03153 60 442 Organic Solute Cotransporters AT3G55740 76.762 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03153 K26247 - gmx:100778997 776.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03153 1 39689734 39695415 Viun1g03153 1 39689734 39695415 ECH
Viun1g03153 1 39689734 39695415 Viun8g02272 8 32825865 32828342 PCT