Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02260 ATGGAGGCTTTATGCAACAGGGATGAAAATTTTCAGAAGAAAAAAGAAGGGCTTCCTTCTTCTGCCAGTGATTCAGCTCAAGAACTCAAAGGGTGTGCTTCTCCTCCTCTTGGCTGGCCTATTCGGAAGGCTACACTCTCCAAATGCCGCAAATCAGATGAGAAAGAAAATGAACCTGTTTCTCACTTGGAAGATACGAAATTTACCAGCATCAGTTCAAAAATGGCAGGAATCGATGCTATGAAGGAAAGGTTTGCAAAATTACTGCTTGGGGAAGATATGTCAGGATCTGGGAAAGGAGTCTGCAGTGCTTTGGCTATCTCAAATGCCATTACAAATCTGTGTGCCACTGTATTTGGGCAATTATGGAGACTAGAACCTGTTCCATGTGAAAAGAAAGAAATGTGGCGGAGGGAGATGGAATGGCTTGTAAGTGTTAGTGATCACATTGTTGAGTTAATACCTTCTTGGCAGACATTTCCAGATGGAAGTAAGCTAGAGGTAATGACTTGCAGACCAAGGTCAGATCTTTTTATGAATCTTCCAGCTCTACGCAAACTCGACAACATGCTTCTTGAAATTTTAGATAGTTGCAAAGATATGGAGTTTTGGTATGTTGATCAAGGAATTGTAGCCCAAGATGCAGAGGGTTCAGCTTCGTTTTGCAAAAGAATTCAGCGACAAGAGGATAAGTGGTGGCTCCCTGTACCTCGTGTGCCCCCTGCTGGCCTCAGTGAGAACTCGAGAAAGCAGTTGAATCACACAAGAGAATGTGCAAGCCAAATTCTAAAAGCTGCCATGGCTATCAACAATGGTGCTTTAGCTGAAATGGAAGTTCCTGAGTCATACTTGGAAACTCTTCCCAAGAATGGAAGAACTTGTTTGGGGGATTTTGTTTACCATTACATTACATCAGAGAAATTCTCTCCAGAGTGTCTCCTTGATTGTCTAGACCTCTCCTCGGAGCATGTGGCACTAGAGATTGCAAACCGTGTTGAAGCCTCAATATATGTGTGGCGTAGAAGAGCTCACTCTAAACCCCCACCTAATCCTAACCGTTCAACTACAAAGTCATCGTGGGAAATTGTGAAGGACTTCATGGCTGATGGAGACAAGAGAGAACTACTAGCAGAAAGAGCTGAAAATGTTCTAATTTCATTGAAGCAAAAGTATCCTGGTCTAACTCAAACCACCTTGGATACCAGCAAGATCCAGTGCAACAAGGATGTTGGAAAATCCATACTAGAGAGCTATTCAAGAGTTTTGGAGAGCATGGCGTTCAACATTGTAGCTCGCATAGACGATTTGCTATATGTGGATGACTTGACCAAACATTCAGATAGGTTTCCATTGGTTCCAATGAAAGTGTCTGTCTCAGGCACTCCTCACAAAGCAGTTGGCACACCAAGCTTTTCTCCTGCTCCACCACTCATTAGTTCTGCAAGGGGAGAGAGATCTCCTTTCCTCAACAACAACATTAACAACAACAACAACAACAACAACATCATGAAACCTCAACGTCGTGGCTTTGGGGTGAGAAGAGTACTATCGAATTATCTTGGTGCAGAATCAAAAGAAACAAAGAATTTTAGCAGTTCAACTGTGGTGGTGAATGGTTCTAACCCATACCCAAGCAGCAATAAAACAGAACAGGTAGAACATCATAAGAAGCCACATGCCATAAATGGCAAGACAAAATGA 1701 0.4268 MEALCNRDENFQKKKEGLPSSASDSAQELKGCASPPLGWPIRKATLSKCRKSDEKENEPVSHLEDTKFTSISSKMAGIDAMKERFAKLLLGEDMSGSGKGVCSALAISNAITNLCATVFGQLWRLEPVPCEKKEMWRREMEWLVSVSDHIVELIPSWQTFPDGSKLEVMTCRPRSDLFMNLPALRKLDNMLLEILDSCKDMEFWYVDQGIVAQDAEGSASFCKRIQRQEDKWWLPVPRVPPAGLSENSRKQLNHTRECASQILKAAMAINNGALAEMEVPESYLETLPKNGRTCLGDFVYHYITSEKFSPECLLDCLDLSSEHVALEIANRVEASIYVWRRRAHSKPPPNPNRSTTKSSWEIVKDFMADGDKRELLAERAENVLISLKQKYPGLTQTTLDTSKIQCNKDVGKSILESYSRVLESMAFNIVARIDDLLYVDDLTKHSDRFPLVPMKVSVSGTPHKAVGTPSFSPAPPLISSARGERSPFLNNNINNNNNNNNIMKPQRRGFGVRRVLSNYLGAESKETKNFSSSTVVVNGSNPYPSSNKTEQVEHHKKPHAINGKTK 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02260 566 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 21 487 IPR038937 GO:0005085
Viun8g02260 566 Gene3D PRONE domain, subdomain 1 308 449 - -
Viun8g02260 566 Gene3D PRONE domain, subdomain 1 70 307 - -
Viun8g02260 566 MobiDBLite consensus disorder prediction 1 15 - -
Viun8g02260 566 FunFam Rop guanine nucleotide exchange factor 14 310 449 - -
Viun8g02260 566 MobiDBLite consensus disorder prediction 1 38 - -
Viun8g02260 566 MobiDBLite consensus disorder prediction 527 566 - -
Viun8g02260 566 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 78 444 IPR005512 GO:0005085
Viun8g02260 566 FunFam Rop guanine nucleotide exchange factor 1 69 309 - -
Viun8g02260 566 FunFam Rop guanine nucleotide exchange factor 7 278 406 - -
Viun8g02260 566 ProSiteProfiles PRONE domain profile. 68 450 IPR005512 GO:0005085
Viun8g02260 566 MobiDBLite consensus disorder prediction 527 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02260 Viun-Chr8 32683793 32687011 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02260 - - gmx:100814278 1012.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03145 1 39598275 39601657 Viun8g02260 8 32683793 32687011 ECH
Viun8g02260 8 32683793 32687011 Viun8g02260 8 32683793 32687011 ECH
Viun1g03145 1 39598275 39601657 Viun8g02260 8 32683793 32687011 PCT