Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03145 ATGGATGTTTTTTTCGACAAGAACGAAACTTCTCGAAACAAAACCGATGGGGTTTCCTCTTCTCTCACGGATTCCACTGCAGACTCCAGGGAAACCAGTTTCTGTGCATCCACTTCTTCAGTTACCGTTGACGAAGCAAAGGCAAAAGGCTCTTCTTCACCCGCTCCTCTGGGTTGGCCCATTCTCAAGGCTACACTCTCCAAGCGCTCTAATTCTCGTGAAAAAGAAAACGAACATAAATCCCACTTGGAAAACACTAAGCTTAGTCGTATTGGTTTGAAGCTGTCAGAAGTTGACATGATGAAGGAGAGGTTTGCAAAATTGTTGCTTGGTGAAGATATGTCAGGTTCTGGTAAAGGGGTTTGCACTGCTTTGGCCATCTCTAATGCCATTACTAATCTGTGTGCAACTGTGTTTGGGCAATTATGGAGACTAGAACCTTTACCTTCTGAGAAGAAAGAAATGTGGCAGAGAGAGGTGGAGTGGCTTGTTAGTGTTAGTGATTACATTGTTGAGTTGATGCCTTCTTGGCAAACATTTCCTGATGGGAGTAAGCTCGAGGTAATGACTTGCAGACCTAGGACAGATATTTTTATCAACCTTCCAGCTCTTCGCAAACTTGATAACATGCTTCTCGAAATTTTAGATAGTTTCACTTCTACAGAGTTCTGGTATGTAGACCAAGGAATTGTAGCCGCAGAAGCAGATGGTTCAGCCTCTTTTCGCAAAACAATACAGCGGCAAGAAGAGAAGTGGTGGCTTCCCGTACCTCGTGTGCCCCCTGCAGGACTCAGTGAAGACTCGAGAAAACAGTTGAATCACTCTCGAGAATGTGCAAACCAAATACTAAAAGCAGCCATGGCTATCAACAACATTGCTTTGGCTGACATGGAAGTTCCTGACTCATATTTGGAAGTTCTTCCTAAGAATGGAAGAACTTGCTTGGGGGATTTTGTTTACCGTTACATAACATCAGATCAATTCTCCCAAGAGTACCTTCTTGATTGCTTAGACATATCCTCTGAACATGTTGCATTAGAGATTGCAAACCGTGTGGAAGCAGCAATTTATGTGTGGCGCCGAAGAGTTCACTCTCGGTTCTTACCATCCCCAAGGCCCAGCCGTTCTACCCCAAAATCATCATGGGAAATAGTCAAGGACTTCATGGCTGATGGAGATAAGAGAGAATTGCTAGCAGATAGAGCTGAAAACATTCTAGTTTCCCTGAAGCAGCGTTTCCCAGGCCTAAGTCAAACCACCCTTGATACCAGCAAGATCCAGTGCAACAAGGATGTCGGGAAATCCGTGCTGGAGAGCTACTCAAGAGTTTTGGAGAGCATGGCATTTAACATTGTAGCTCGCATTGATGATTTGCTATATGTGGATGACTTGACCAAACAATCAGAGAGGTTTGCATTAGTTCCTACTACTGCTACAACAGTTAACGTGGTTTCTCAGCAGAAGAAGGTTACACGTCCACATTCGGTGTCTGTCTCAGGCACTGTTACTCCGCACAAAGCAGCATTTGGCAGACCAGGCTTTTCACCAGCTTCTGTGTCACTCATTAGTCCTGCAAGAGGGGAGAGAACTCCTTTCCTCCATAACAACGACAGCATCAAACCTCATCGTCGTGGCTTTGGGGTGAGGAGAGTGCTGTCAAATTACCTTGGAGTAGAGACAAAGACCACTAAGATATGCAGCAACTCAACTGAGGTGAAATGTTCAAACCCAAGTAGCAAGAAAACTGAACAACAACGTGAGAAGAAACCATGCACAATCAAGAACAAAACCAAATGA 1797 0.4446 MDVFFDKNETSRNKTDGVSSSLTDSTADSRETSFCASTSSVTVDEAKAKGSSSPAPLGWPILKATLSKRSNSREKENEHKSHLENTKLSRIGLKLSEVDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPSEKKEMWQREVEWLVSVSDYIVELMPSWQTFPDGSKLEVMTCRPRTDIFINLPALRKLDNMLLEILDSFTSTEFWYVDQGIVAAEADGSASFRKTIQRQEEKWWLPVPRVPPAGLSEDSRKQLNHSRECANQILKAAMAINNIALADMEVPDSYLEVLPKNGRTCLGDFVYRYITSDQFSQEYLLDCLDISSEHVALEIANRVEAAIYVWRRRVHSRFLPSPRPSRSTPKSSWEIVKDFMADGDKRELLADRAENILVSLKQRFPGLSQTTLDTSKIQCNKDVGKSVLESYSRVLESMAFNIVARIDDLLYVDDLTKQSERFALVPTTATTVNVVSQQKKVTRPHSVSVSGTVTPHKAAFGRPGFSPASVSLISPARGERTPFLHNNDSIKPHRRGFGVRRVLSNYLGVETKTTKICSNSTEVKCSNPSSKKTEQQREKKPCTIKNKTK 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03145 598 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 96 466 IPR005512 GO:0005085
Viun1g03145 598 MobiDBLite consensus disorder prediction 14 47 - -
Viun1g03145 598 FunFam Rop guanine nucleotide exchange factor 7 298 428 - -
Viun1g03145 598 Gene3D PRONE domain, subdomain 1 332 472 - -
Viun1g03145 598 Gene3D PRONE domain, subdomain 1 90 331 - -
Viun1g03145 598 FunFam Rop guanine nucleotide exchange factor 14 330 471 - -
Viun1g03145 598 MobiDBLite consensus disorder prediction 1 54 - -
Viun1g03145 598 FunFam Rop guanine nucleotide exchange factor 1 89 329 - -
Viun1g03145 598 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 20 534 IPR038937 GO:0005085
Viun1g03145 598 MobiDBLite consensus disorder prediction 570 598 - -
Viun1g03145 598 MobiDBLite consensus disorder prediction 580 598 - -
Viun1g03145 598 ProSiteProfiles PRONE domain profile. 88 472 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03145 Viun-Chr1 39598275 39601657 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03145 - - vum:124834739 1128.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03145 1 39598275 39601657 Viun1g03145 1 39598275 39601657 ECH
Viun1g03145 1 39598275 39601657 Viun8g02260 8 32683793 32687011 ECH
Viun1g03145 1 39598275 39601657 Viun8g02260 8 32683793 32687011 PCT