Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02054 ATGGCTGCAGACCCTCAGAAAATTCACCCTGTCTATGATGTTGAAGCACCAAACCACCCTTCTGCACCCTTGGTGCCAAGAAGCATGTCTAAATCTGATGCAGGTGATCCAGAGAGAGCAGTGTTACAACAACAGCAACAGCAACAGCAACAACAACATCCTCCACAACACACCATTCCTGTGATGAGGCCACCAAAGAAAAGAAGAAGCTGCTGCTGCAGGTTTTTCTGTTGGTTGATAAGCATATTGCTGATTCTGATTGTGGCCATTGGCATCACAGTTGGGATACTATACCTTGTGTTCAGACCAAAGGTTCCAAAGTACTCGGTGGATGAGCTTATAGTCACACAGTTTGATATCTCTGACAATAACAGTTTATCTGCCACTTTCAACTTGACAATCACTGCCAGAAACCCTAACAAGAAGATTGGAATATACTACAGAGGTGGCAGCCATATAAGTGCTTGGTACGATGACACAAAACTATGTGAAGGGTCTTTACCAAAGTTCTACCAAGGTCACCGCAACACCACAGTGCTCAGTATCCCTCTCACTGGTCAAACACAGGATGCTACTGGTCTGCAAACTAGTCTTCAGCAGCAGCTGCAGGAAACAGCAAATGTGCCTCTCAATTTGAAGGTGAATCAGCCTGTGAGGATCAAGCTTGGGAAGTTGAAACTGTTCACAATCAAGTTCAGGGTTAGGTGCAAGATTGTGGTGGACAATCTTAGTGCTAATAGTTCTATCAGAATTCAGAGCAGTAGTTGTAAATTCAGGATTAGGCTGTGA 789 0.4436 MAADPQKIHPVYDVEAPNHPSAPLVPRSMSKSDAGDPERAVLQQQQQQQQQQHPPQHTIPVMRPPKKRRSCCCRFFCWLISILLILIVAIGITVGILYLVFRPKVPKYSVDELIVTQFDISDNNSLSATFNLTITARNPNKKIGIYYRGGSHISAWYDDTKLCEGSLPKFYQGHRNTTVLSIPLTGQTQDATGLQTSLQQQLQETANVPLNLKVNQPVRIKLGKLKLFTIKFRVRCKIVVDNLSANSSIRIQSSSCKFRIRL 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02054 262 MobiDBLite consensus disorder prediction 39 57 - -
Viun8g02054 262 Pfam Late embryogenesis abundant protein 133 237 IPR004864 -
Viun8g02054 262 SUPERFAMILY LEA14-like 112 218 - -
Viun8g02054 262 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 43 244 - -
Viun8g02054 262 Gene3D - 100 245 - -
Viun8g02054 262 MobiDBLite consensus disorder prediction 1 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02054 Viun-Chr8 31084446 31085586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02054 37 253 EF-hand Containing Proteins AT5G21130 29.730 4.66e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02054 - - gmx:100782663 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02054 8 31084446 31085586 Viun8g02054 8 31084446 31085586 ECH
Viun6g01379 6 22507982 22509049 Viun8g02054 8 31084446 31085586 PCT