Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01730 ATGGGAAGAATTTCAAGGACCACGAGTTACGCAATTGCCTCTTCAATGCAAGATAACCAACACCAACCACCTTTCATTACATGCACCACTTTTAACATTCTTGCACCAATATACAAGCGTCTCAACCATGAGGATCAGAATTGCCGTGAAAGTGACTTCAAAGCATGTTGGTTGGCCAGGAATCAAAGGATATTGGATTGGTTGTTGTATGAGAGATCTTCCATTATCTGTCTTCAGGAATTTTGGATTGGAAACAAAGAGCTTGTTGATTTGTATGACAAGAGACTTGGTGATACTGGTTATATTAATTTCAAGCTTGCAAGGACCAACAATCGTGGTGATGGTCTTCTGATAGCAGTGCAAAAGGAATATTTCACAGTTGTTAACTATAAAGAGTTGCACTTTAATGATTGTAGTGATCGAGTAGCTCAACTGTTACACGTTGAGTTAGCTTTTCCCTTTTCACAGTGTCAAAACAGTGATGTTAGGCACGAAATTCTGATTGTCAACACTCACCTACTGTTTCCTCATGATCCCAGTCTTTGCCTTGTACGACTGCATCAAGTCTACAAGTTACTTCAATATATCCAATCTTATCAGAATGAGCACCAACTTAAGCCTCTGCCAATCATATTATGCGGTGACTGGAATGGAAGCAAACGGGGACATGTTTACAAGTTCCTGAGATCTCAGGGGTTTGTATCATCATATGATGTTGCACATCATTACACTGATGCTGATGCTCACAAGTGGGTTAGCCACCACAATCATCTTGGAAACATATGTGCTGTTGATTTTATATGGCTTCTTAACCCTGACAAATATCAAAAACTACTTCAAACAAGTTGGAGTGAAGCACTATTTAGCATGTTTAAGTATCTATTGCGAAGAGATTCACTGACAGAGAGAGATGCATTTGCTTTTCTAAAGGTTGACAATGAAGATTGTATTACCTATTCTAGTTTCTGTGCAGCACTTATACAGCTTAATTTAATTGGTCATTGTCATGGGTTAAGTGTTGAAGAGACAAAGGACTTGTGGGTTCAAGCAGATATAAATGGAAATGGTGTTATTGATTATAAAGGATTTCTGCAAATCTGGAATCCAACAGGATCAGATCAAAGAGATGACAAAAATGGGCAACATGATGATGAAACAGATGGTAGTGAAACAATTGGTTTTAATGTAAAAAATGCAGTTCTTTTCCCTCCAGAGGTGGAAAAAGGTAGATGGCCTGAAGACTACTCTCTCTCTGATCATGCAACACTCACTGTAGTGTTCTCACCCATAAGAATGCTATGCCACACCACAAAATAA 1317 0.3865 MGRISRTTSYAIASSMQDNQHQPPFITCTTFNILAPIYKRLNHEDQNCRESDFKACWLARNQRILDWLLYERSSIICLQEFWIGNKELVDLYDKRLGDTGYINFKLARTNNRGDGLLIAVQKEYFTVVNYKELHFNDCSDRVAQLLHVELAFPFSQCQNSDVRHEILIVNTHLLFPHDPSLCLVRLHQVYKLLQYIQSYQNEHQLKPLPIILCGDWNGSKRGHVYKFLRSQGFVSSYDVAHHYTDADAHKWVSHHNHLGNICAVDFIWLLNPDKYQKLLQTSWSEALFSMFKYLLRRDSLTERDAFAFLKVDNEDCITYSSFCAALIQLNLIGHCHGLSVEETKDLWVQADINGNGVIDYKGFLQIWNPTGSDQRDDKNGQHDDETDGSETIGFNVKNAVLFPPEVEKGRWPEDYSLSDHATLTVVFSPIRMLCHTTK 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01730 438 MobiDBLite consensus disorder prediction 371 391 - -
Viun8g01730 438 Pfam Endonuclease/Exonuclease/phosphatase family 36 239 IPR005135 GO:0003824
Viun8g01730 438 SUPERFAMILY DNase I-like 23 240 IPR036691 -
Viun8g01730 438 FunFam Putative calcium-binding protein 9 431 - -
Viun8g01730 438 MobiDBLite consensus disorder prediction 375 390 - -
Viun8g01730 438 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 22 427 - -
Viun8g01730 438 Gene3D Endonuclease/exonuclease/phosphatase 5 432 IPR036691 -
Viun8g01730 438 SUPERFAMILY EF-hand 287 367 IPR011992 -
Viun8g01730 438 Gene3D - 272 368 - -
Viun8g01730 438 ProSiteProfiles EF-hand calcium-binding domain profile. 338 373 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01730 Viun-Chr8 28263916 28267783 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01730 2 332 EF-hand Containing Proteins AT5G54130 72.590 1.05e-180 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01730 - - gmx:100792805 808.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01730 8 28263916 28267783 Viun9g02017 9 30008130 30012284 PCT