Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01718 ATGCCAATAGTGGTATCATGGAAGTTCCAAACTTTCTGTGTCATTTTGTTTACTTTCTTGTCTTATTCTTTCTCTTCTATTTTCACCATAACCAATAACTGCCCTTATACCATATGGCCCGGCACACTCTCTGGTTCCGGCTCACCGCCGCTTCCGACCACCGGATTCCGGCTGGACTCCGGCCAGATGATCAAACTCACCAGTGTTCCCGGTTGGTCGGGGAGAATCTGGGCTAGGACTGGGTGCACATTTGATGCAACAGGAATTGGCAAGTGTGAAACAGGTGATTGTGGTGGAAGATTGGAATGTGATGGAAATGGTGCTGCTCCTCCTACCTCATTGTTTGAGATAACTCTTGGCAAAGGCAATGACCAAGACTTCTATGATGTCAGCATGGTGGATGGCTACAATCTGCCATTGCTTGTTCAACCAAGAGGTGTGTATGGTTCTGGAGTCTGCAATGCCACAGGTTGTGTCACAGACATCAACAGAGGTTGTCCAAAAGAACTTCAAGTAGTGGGAGGAGATGGATACCAGGATGGTGTAGTTGGGTGTAAAAGTGCTTGTGAGGCATTTGGATCAGATGAGTACTGTTGCAGTGGAGAATTTGCCAATCCAAGCACATGCCAGCCATCCTATTATTCCACCCTTTTCAAGCAGGCTTGTCCAAAAGCTTATAGCTATGCATTTGATGATGCTACCAGCACTTTCATTTGCAAAGCTTTTGAATATGACATTGTTTTTTGTCCCAACACCAACAGGGCTAGAAAACCAAATGCTCCAGTTCCTCCTCTACCACCATCAATTGGATGGCCTGATCAGAAGCAAAGTCTCAGACACTGA 843 0.4603 MPIVVSWKFQTFCVILFTFLSYSFSSIFTITNNCPYTIWPGTLSGSGSPPLPTTGFRLDSGQMIKLTSVPGWSGRIWARTGCTFDATGIGKCETGDCGGRLECDGNGAAPPTSLFEITLGKGNDQDFYDVSMVDGYNLPLLVQPRGVYGSGVCNATGCVTDINRGCPKELQVVGGDGYQDGVVGCKSACEAFGSDEYCCSGEFANPSTCQPSYYSTLFKQACPKAYSYAFDDATSTFICKAFEYDIVFCPNTNRARKPNAPVPPLPPSIGWPDQKQSLRH 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01718 280 SUPERFAMILY Osmotin, thaumatin-like protein 27 251 IPR037176 -
Viun8g01718 280 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Viun8g01718 280 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Viun8g01718 280 PRINTS Pathogenesis-related protein signature 240 249 IPR001938 -
Viun8g01718 280 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Viun8g01718 280 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Viun8g01718 280 Gene3D Thaumatin 27 250 IPR037176 -
Viun8g01718 280 SMART tha2 28 250 IPR001938 -
Viun8g01718 280 ProSitePatterns Thaumatin family signature. 88 103 IPR017949 -
Viun8g01718 280 ProSiteProfiles Thaumatin family profile. 25 250 IPR001938 -
Viun8g01718 280 FunFam THAUMATIN-LIKE PROTEIN 1 26 250 - -
Viun8g01718 280 PANTHER OS03G0233200 PROTEIN 13 250 IPR001938 -
Viun8g01718 280 MobiDBLite consensus disorder prediction 259 280 - -
Viun8g01718 280 PIRSF PR5 1 264 IPR001938 -
Viun8g01718 280 Pfam Thaumatin family 32 250 IPR001938 -
Viun8g01718 280 CDD TLP-PA 27 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01718 Viun-Chr8 28122240 28123878 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01718 12 251 Receptor kinase-like Gene Family AT5G38280 46.694 7.97e-72 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01718 - - gmx:100790173 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01718 8 28122240 28123878 Viun9g02006 9 29860166 29861777 PCT