Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01467 ATGGCAGCAAAGGCAAAGAACAACAACAATGAATTCGGGTGTGGCCTCATGGGGAGAATTCTCCACCTCAAAAGCCACAAGCTCAGAAAAGCCTCTGTTCACTCCCTACCCTTGAAGAATCCGCAGAGTGATGATGATGGCAAAAGTGAAGAACCAAAGAACATCCCAAATGAAGAATCCAAGGTTACGAAAAAAAGTTTTACTGATACTCAGCCTCACAGAGTGAGTGGTGCAGAACAGAAACCGGCCAGAAAAAGTGCCTCTGTTCACCAACAACAACTTAGTACATACCGAAACAGTCAAAATCAAAGGCATTCGGATGTTGTTGCAAGAAGCTCAACATCATCATCATCATCTCCTAGAACTTCAATTTCAACTCACATTAAGGTTCAACAAAACAAGGACAAGAATCATGAGAGCAAGCCACATAGAGACCCCACTGACAATTCTCTTGCACTTGCTAGGATAAGCACCGGCAATGAGAACAATAAGTCTCAGTTGAAGCTCACTGGGAATTTGCTTGTGAATAACACCCCAAGGAGAAAGAGTGTGGAGTACATGCCAAAAAATGCAGAGTTGAACTCTGCACCCATTTCCTACTCCAATACAAGCAAAGGCTTAATGGGGAATATCATGAGGAGAAACAGCACAGGGAATGAGCTTGGACAGTTTTTGAGTCCAAGGCAGAAAAAAGTGGACCCTGAGGTGTTGAAATCCATGGGAAATGAAGCATACAAGCAGGGAAGATTTGAAGAGGCTTTGGCTTTGTATGACAGAGCAATTGCTCTTGATTCAAATATGGCAACGTACCATTGCAACAAGAGTGCAGCTTTAATTGGCTTAGGAAGGCTTCAAGAAGCAATTTTTGAGTGTGAGGAATCTATCAAACTGGACCCTTCTTATGTCAGAGCTCACAACCGTTTGGCCACAATATATTTCAGGTTGGGAGAAGCAGAAAAAGCACTGGATTGGAATCAATCAACAGGATGTGCTGATTCAATACTTGCTTTCCAAGCTCAGACTCTTCAAAATCACCTTAACAAATGCATAGAAGCACGGAAAGTAAATGCATGGAGTGAAATACTAAGGGAAACACAGTCTGCAATATCCTTAGGTGCTGATTCAGCTCCACAGGTCTATGCTTTACAAACTGAAGCCTTTCTGAAGCTCCTAAGATATCAAGAGGCTTATGCCATCTATGAAAATATGCCAAAATTTCCACTTGATTGGTGTACCAAGGTATTTGGTCCGGCTCGCAGCGCTTACCTGTTGATGATAAGGGCACTGGTTTATTTGGCCTCTGGCAGGTTTGAGGAAGCTGTGACAGCAGCTCAGGAAGCAGCTAAAGTTGATCCAGGAAACAGAGAGGTGAATGCAGTGGTAAGGAGGGCCAGAGCAGCAACATCAGCTAGAATGAGTGGGAACTTGCTTTTCAAGGCCTCAAAATTCACCGAAGCATGTAGCGTGTACAACGAAGGACTTGAACATGATCCTCACAACTCAGTTCTGTTATGCAACAGAGCTGCTTGTCGTTCTAAGCTTGCCCAATACGAGAAAGCCATTGAAGATTGTAACGCCGCACTAATGTTTCAGCCAGGTTATAGCAAAGCAAGGTTAAGGAGAGCAGATTGCAATGCTAAGTTAGAACGGTGGGAAGCTGCTATTCAAGACTATGAAATGCTATTGAGAGAAAGGCCAGGGGATGAGGAAGTGGCAAGGGCTTTGTTTGAAGCTCAGCTCCAACTCAAGATGCTGCGAGGTGAAGATATCAAGGACTTGAAATTTGGTTCTAACTTGGTTTTCATCTCAAGCAATGATCGGTTCAGACATTATGTAACCTCACCTGGGATGGCTGTGGTGCTGTTTAGCAACAAGGCAACCCACAAGAAAGTGTTACTTATGTTGGAGCAAACCAGCAAAAGATTCCCATCACTTCATTTCCTCAAGGTGGAAATTGAAGACCATCCTTATTTAGCAAAGTCAGAAGGTGTGAGCTCCATCCCAGCTTTCAGAATATACAAAAACGGATCAAGAGTTAAAGAAATTTCAGGCAACAACTACGAGTTGTTAGAAAGATCAGTTGAGTTATATAGTAGATGA 2100 0.4314 MAAKAKNNNNEFGCGLMGRILHLKSHKLRKASVHSLPLKNPQSDDDGKSEEPKNIPNEESKVTKKSFTDTQPHRVSGAEQKPARKSASVHQQQLSTYRNSQNQRHSDVVARSSTSSSSSPRTSISTHIKVQQNKDKNHESKPHRDPTDNSLALARISTGNENNKSQLKLTGNLLVNNTPRRKSVEYMPKNAELNSAPISYSNTSKGLMGNIMRRNSTGNELGQFLSPRQKKVDPEVLKSMGNEAYKQGRFEEALALYDRAIALDSNMATYHCNKSAALIGLGRLQEAIFECEESIKLDPSYVRAHNRLATIYFRLGEAEKALDWNQSTGCADSILAFQAQTLQNHLNKCIEARKVNAWSEILRETQSAISLGADSAPQVYALQTEAFLKLLRYQEAYAIYENMPKFPLDWCTKVFGPARSAYLLMIRALVYLASGRFEEAVTAAQEAAKVDPGNREVNAVVRRARAATSARMSGNLLFKASKFTEACSVYNEGLEHDPHNSVLLCNRAACRSKLAQYEKAIEDCNAALMFQPGYSKARLRRADCNAKLERWEAAIQDYEMLLRERPGDEEVARALFEAQLQLKMLRGEDIKDLKFGSNLVFISSNDRFRHYVTSPGMAVVLFSNKATHKKVLLMLEQTSKRFPSLHFLKVEIEDHPYLAKSEGVSSIPAFRIYKNGSRVKEISGNNYELLERSVELYSR 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01467 699 MobiDBLite consensus disorder prediction 131 148 - -
Viun8g01467 699 ProSiteProfiles TPR repeat profile. 467 500 IPR019734 GO:0005515
Viun8g01467 699 Gene3D Glutaredoxin 594 698 - -
Viun8g01467 699 SMART tpr_5 467 500 IPR019734 GO:0005515
Viun8g01467 699 SMART tpr_5 501 534 IPR019734 GO:0005515
Viun8g01467 699 SMART tpr_5 268 301 IPR019734 GO:0005515
Viun8g01467 699 SMART tpr_5 302 334 IPR019734 GO:0005515
Viun8g01467 699 SMART tpr_5 421 454 IPR019734 GO:0005515
Viun8g01467 699 SMART tpr_5 234 267 IPR019734 GO:0005515
Viun8g01467 699 SMART tpr_5 535 568 IPR019734 GO:0005515
Viun8g01467 699 Gene3D Tetratricopeptide repeat domain 232 586 IPR011990 GO:0005515
Viun8g01467 699 MobiDBLite consensus disorder prediction 85 130 - -
Viun8g01467 699 SUPERFAMILY TPR-like 234 456 IPR011990 GO:0005515
Viun8g01467 699 Coils Coil 541 561 - -
Viun8g01467 699 Pfam Tetratricopeptide repeat 516 568 - -
Viun8g01467 699 Pfam Tetratricopeptide repeat 428 500 - -
Viun8g01467 699 ProSiteProfiles TPR repeat profile. 421 454 IPR019734 GO:0005515
Viun8g01467 699 SUPERFAMILY Thioredoxin-like 522 691 IPR036249 -
Viun8g01467 699 CDD TRX_family 608 695 - -
Viun8g01467 699 Pfam TPR repeat 241 276 - -
Viun8g01467 699 MobiDBLite consensus disorder prediction 32 149 - -
Viun8g01467 699 SUPERFAMILY TPR-like 471 583 IPR011990 GO:0005515
Viun8g01467 699 ProSiteProfiles TPR repeat profile. 234 267 IPR019734 GO:0005515
Viun8g01467 699 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 15 695 IPR044534 -
Viun8g01467 699 MobiDBLite consensus disorder prediction 41 68 - -
Viun8g01467 699 Pfam Thioredoxin 629 687 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01467 Viun-Chr8 24034751 24038111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01467 228 537 Glycosyltransferase AT3G04240 21.086 3.34e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01467 K09527 - gmx:100791862 1093.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01467 8 24034751 24038111 Viun9g02561 9 34700578 34704291 PCT