Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00782 ATGCAGCTCTTTAGGTACGTTCCACCTTTGGTCTTTGGCGTCCATGGGAGCATAGATTGTTTTGGGTGCTGCAAAAGAACTCCAGAGATTATTTCAATGGATGAAGCTTCTAAAGGACTAAGAGCTCAAGAACAAACAGGGACCAGAATGGAAAGATCAGATGGTTTCTGGAGCAGCAGCACCTTTGAATTAGACCCTAGTGAAGCTCACTCGCAGAGAAGCATCTCATCGATTGGAATATCAAATAATCCTTCTGATCCTCAAAGTAGTGGAGGCAGTCAAACTGGTCCTCCAGAATTTGTTAACCATGGGCTTCTTCTCTGGAACCAGATAAGGCAACAATGGGTAGGAAAAAAAGGGTCTGAGAGTATCACAGAAATTCAAGAACCAAGAATAAGTTCCAATGCAACCTATGACACCTTACTTGGGAGCAACAAGCCCTTTCCCCAACGCATTCCTTTGAGAGAAATGGTTGACTTTCTTGTTGATATTTGGGAGCAAGAGGGTTTGTATGACTGA 519 0.4335 MQLFRYVPPLVFGVHGSIDCFGCCKRTPEIISMDEASKGLRAQEQTGTRMERSDGFWSSSTFELDPSEAHSQRSISSIGISNNPSDPQSSGGSQTGPPEFVNHGLLLWNQIRQQWVGKKGSESITEIQEPRISSNATYDTLLGSNKPFPQRIPLREMVDFLVDIWEQEGLYD 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00782 172 MobiDBLite consensus disorder prediction 35 96 - -
Viun8g00782 172 Pfam Protein of unknown function (DUF4050) 61 128 IPR025124 -
Viun8g00782 172 Pfam Protein of unknown function (DUF4050) 132 172 IPR025124 -
Viun8g00782 172 PANTHER OS07G0479600 PROTEIN 17 172 - -
Viun8g00782 172 MobiDBLite consensus disorder prediction 39 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00782 Viun-Chr8 6850996 6854250 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00782 - - gmx:100793281 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00782 8 6850996 6854250 Viun8g00782 8 6850996 6854250 ECH
Viun3g04860 3 55778581 55781880 Viun8g00782 8 6850996 6854250 ECH