Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04860 ATGAAACCAACACCAATTATTGCTGTGGATGAGCCGGCAAAGGGACTAAGAATTCAGGGCCAGACTGTGAGAAAACCACATATATCAGATGGTTTCTGGAGTTCCAGCACTTGTGATCTGGATAATGCCAACATTCAATCTCAGAGAAGTATCTCGTCTGTCAGTACATTAAATCAAATTCTCTATCATAGTGGTGGAACTTCTACTACAGGCACCAATTCTGAATTTGTAAACCCAGGTCTTCTTCTCTGGAATGAAAGTAGGCTTCAGTGGATTGGAAGTGAAAAATCTAGCAAGCCTAGCCAACAACAAAAACGTGAACCCAGACTGAATTGGAATGCAACTTACGAAAGTTTGCTTGGGACCAGACAACCTTTCCCCAAGTCCATACCTTTATCTGAAATGGTGGAATTCCTGGTGGATGTTTGGGAACGTGAAGGGATGTATGGTTGA 453 0.4238 MKPTPIIAVDEPAKGLRIQGQTVRKPHISDGFWSSSTCDLDNANIQSQRSISSVSTLNQILYHSGGTSTTGTNSEFVNPGLLLWNESRLQWIGSEKSSKPSQQQKREPRLNWNATYESLLGTRQPFPKSIPLSEMVEFLVDVWEREGMYG 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04860 150 PANTHER OS07G0479600 PROTEIN 2 149 - -
Viun3g04860 150 Pfam Protein of unknown function (DUF4050) 109 149 IPR025124 -
Viun3g04860 150 Pfam Protein of unknown function (DUF4050) 37 106 IPR025124 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04860 Viun-Chr3 55778581 55781880 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04860 - - gmx:100813288 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04860 3 55778581 55781880 Viun10g02740 10 40496837 40499671 ECH
Viun3g04860 3 55778581 55781880 Viun8g00782 8 6850996 6854250 ECH
Viun3g04860 3 55778581 55781880 Viun3g04860 3 55778581 55781880 ECH