Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03585 ATGAAGCTTCGGAGATCTTCGTTTTGCGTCTTTCTAGGGTTTCTGGTGCTGTTCCTTTCGGCGCCGTCAATGGCGAAATTCGTGGTGGAGAAGAACAGTTTGACGGTAACGTCACCGGACAACATCAAGGGCACGCACGATAGCGCGATTGGGAACTTTGGGATACCTCAATACGGAGGCAGCATGGCTGGGAACGTGGTGTATCCTAAGGACAATAAAAAGGGTTGCAAGGAGTTTGATGAGTCTGGGATTTCCTTTAAATCTAAACCCGGTGCTCTTCCTACTATCGTTTTGCTCGATCGAGGAAATTGCTTCTTTGCTTTGAAGGTCTGGAATGCACAAAAGGCTGGAGCTTCTGCTGTTCTTGTTGCTGATGACATTGAGGAAAAGTTGATAACCATGGACACTCCTGAAGAAGATGGGTCTTCTGCAAAATACATAGAGAACATAACTATACCATCTGCCCTCATTGAAAAAAGTTTTGGTGGAAAGTTAAAGGATGCCATAAGTAATGGGGATATGGTCAATGTAAATCTTGATTGGAGAGAGGCTGTCCCCCACCCAGATGATCGTGTGGAGTATGAACTGTGGACCAACAGCAATGATGAGTGTGGAGTTAAATGTGACATGTTGATGGAATTTGTGAAAGATTTTAAGGGTGCGGCACAGATATTGGAGAAAGGTGGTTATACTCAATTTACGCCCCATTATATAACTTGGTACTGTCCTCAGGCTTTCACATTGAGCAAACAGTGCAAGTCCCAGTGCATTAATCATGGGAGATATTGTGCTCCAGATCCTGAGCAGGATTTCAGTACTGGATATGACGGAAAGGATGTAGTGATTGAAAACTTAAGGCAGCTATGTGTTTTCAAGGTGGCAAATGAAACCAAAAAGCCTTGGGTGTGGTGGGATTATGTCACTGATTTTCAAATTAGATGCCCAATGAAGGAGAAAAAATACAACAAGAAATGTGCAGATGCTGTCATTGAATCACTTGGCCTTGATATTAAAAAGATTGAAAGGTGCATGGGAGATCCAAATAATGATGCTGAAAATCCTGTTTTGAAAGAAGAGCAAGATGCCCAGGTTGGGAAGGGATCACGAGGTGATGTTACCATATTGCCTACCCTAGTTGTCAACAATAGACAGTATCGAGGAAAATTGGAGAAAGGTGCTGTTATGAAAGCTATTTGTGCTGGTTTTGAAGAAACTACCGAACCTGCTATTTGTTTGAGCAGTGATGTGGAGACAAATGAGTGCTTAGAGAATAATGGTGGTTGTTGGCAGGATAAATCAGCTAACATCACCGCATGCAAGGATACTTTCCGGGGGAGAGTATGTGAATGCCCCTTGGTGGATGGTGTGCAGTTCAAAGGAGATGGTTATACAACATGTGCAGCCAGTGGACCTGGCCGATGCAAGATAAACAACGGAGGTTGTTGGCATGAAGCTAGGAATGGACATGCATATTCTGCTTGTTTGGATGATGGAGGGGTTAAATGCAAGTGTCCTGCAGGCTTCAAAGGTGATGGTGTCAAAAATTGTGAAGACATTGATGAATGCAGAGAGAAGAAAGCTTGTCAGTGCCCTGAATGTAGCTGCAAGAATACTTGGGGCAGCTATGACTGCACTTGCAGTGGAGATCTTTTGTATATAAGGGACCATGATACTTGCATAAGTAAAACTGCCCGTCAGGAGGGAAGATCAGCTTGGACTGTTTTTTGGGTTATTTTAGTTGGCTTAGTTATGGCTGCTGCTGGGGCATACCTCCTCTACAAATATAGAATAAGGTCTTACATGGATTCCGAGATCAGAGCTATCATGGCACAGTATATGCCCTTGGACAGCCAATCAGAGGTTGTAAATCATGCGAACGATGAAAGAGCGTGA 1893 0.4369 MKLRRSSFCVFLGFLVLFLSAPSMAKFVVEKNSLTVTSPDNIKGTHDSAIGNFGIPQYGGSMAGNVVYPKDNKKGCKEFDESGISFKSKPGALPTIVLLDRGNCFFALKVWNAQKAGASAVLVADDIEEKLITMDTPEEDGSSAKYIENITIPSALIEKSFGGKLKDAISNGDMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMEFVKDFKGAAQILEKGGYTQFTPHYITWYCPQAFTLSKQCKSQCINHGRYCAPDPEQDFSTGYDGKDVVIENLRQLCVFKVANETKKPWVWWDYVTDFQIRCPMKEKKYNKKCADAVIESLGLDIKKIERCMGDPNNDAENPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKLEKGAVMKAICAGFEETTEPAICLSSDVETNECLENNGGCWQDKSANITACKDTFRGRVCECPLVDGVQFKGDGYTTCAASGPGRCKINNGGCWHEARNGHAYSACLDDGGVKCKCPAGFKGDGVKNCEDIDECREKKACQCPECSCKNTWGSYDCTCSGDLLYIRDHDTCISKTARQEGRSAWTVFWVILVGLVMAAAGAYLLYKYRIRSYMDSEIRAIMAQYMPLDSQSEVVNHANDERA 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03585 630 CDD EGF_CA 518 546 - -
Viun7g03585 630 SMART egfca_6 518 560 IPR001881 GO:0005509
Viun7g03585 630 Pfam PA domain 63 162 IPR003137 -
Viun7g03585 630 FunFam vacuolar-sorting receptor 1 411 467 - -
Viun7g03585 630 ProSitePatterns EGF-like domain signature 2. 502 516 IPR000742 -
Viun7g03585 630 Pfam Complement Clr-like EGF-like 501 521 IPR026823 -
Viun7g03585 630 CDD PA_VSR 52 179 - -
Viun7g03585 630 Gene3D - 24 188 - -
Viun7g03585 630 ProSitePatterns Calcium-binding EGF-like domain signature. 518 544 IPR018097 GO:0005509
Viun7g03585 630 Gene3D Laminin 411 467 - -
Viun7g03585 630 Gene3D Laminin 472 552 - -
Viun7g03585 630 FunFam Vacuolar-sorting receptor 1 24 188 - -
Viun7g03585 630 PANTHER PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN 2 619 - -
Viun7g03585 630 SUPERFAMILY PA domain 32 148 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03585 Viun-Chr7 37126390 37130869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03585 25 630 Miscellaneous Gene Families AT2G14740 83.828 0.0 1088
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03585 - - gmx:100803958 1268.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03585 7 37126390 37130869 Viun7g03585 7 37126390 37130869 ECH
Viun2g02944 2 33647109 33651321 Viun7g03585 7 37126390 37130869 PCT