Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02944 ATGAAGGTTTGGAGATGGTTGCTGAGTTTGTTTGTGGGGTTATTGTTGCCTGTGTCGATAATGGGTCGATTCGTGGTGGAGAAGAACAGCCTGAGAGTGGCGTCGCCGGACAAAATAAGAGGTACTCACGACAGTGCCATTGGGAACTTCGGCATCCCTCAATACGGTGGTAGCATGGCGGGGAACGTCGTTTACCCAAAGGATAACAAGAAAGGTTGTAAAGAGTTTGATGAGTCTGGGATTTCCTTCAAATCAAGCCCCGGTGCTCTTCCCACCATTGTTCTGCTCGATCGCGGAAGTTGTTTCTTTGCATTGAAGGTCTGGAATGCTCAGAAGGCTGGAGCTTCTGCGGTTCTTGTTGCAGATGATGTTGAGGAGCCCTTAATAACTATGGACACCCCTGAAGAGGATGGGTCATCTGCCAAATATGTGGAGAACATAACTATACCATCTGCTCTTGTTGGAAAAAGTTTTGGTGAAAAGTTAAAGGATGCCATAAGTGGCGGGGACATGGTCAACGTAAATCTTGATTGGAGAGAGTCTGTCCCTCACCCAGATGATCGTGTGGAGTATGAGTTGTGGAGCAACAGCAATGATGAGTGTGGAGTTAAGTGTGACATGTTGATGGAATTTGTGAAGGATTTCAAGGGTGCAGCGCAGATACTAGAGAAAGGCGGTTACACTCAGTTTACACCCCATTATATAACTTGGTACTGTCCTCATGCTTTCACATTGAGCAAACAGTGCAAGTCTCAATGCATAAATCATGGAAGATATTGTGCTCCAGACCCTGAGCAGGACTTCAGCACTGGTTATGACGGGAAAGATGTGGTTGTTGAAAATTTGAGGCAGCTATGTGTTTTCAAGGTGGCAAATGAAACTGGAAAGCCTTGGGTCTGGTGGGACTATGTCACTGATTTTCAAATTAGATGCCCCATGAAGGAGAAAAAGTACAATAAGGAATGTGCAGATGCTGTTATTAAATCACTGGGTCTTAATATTGAAAAGATTGGAAAATGCATGGGCGACCCAGATGCTGATGCTGATAATCCTGTCTTGAAAGAAGAGCAAGATGCCCAAATTGGAAAGGGATCACGAGGTGATGTTACCATCTTGCCTACTCTTGTGGTCAATAATCGACAATATCGAGGAAAATTGGAGAAAGGAGCTGTTCTAAAGGCTATATGTTCTGGGTTTGAGGAGACTACCGAACCAGCTGTTTGCCTGAGCACTGATGTGGAGACAAATGAGTGCTTGTCAAACAATGGTGGTTGTTGGCAGGATACAGCAGCTAACATCACTGCGTGCAAGGATACATTCCGTGGGAGAGTATGTGAATGCCCCCTGGTTGACGGTGTTCAATTCAAGGGAGATGGTTACACATCTTGTGAAGCAAGAGGACTTGGACGTTGCAAGATAAACAATGGAGGATGTTGGCATGATGCCCGAAATGGACATGCATTTTCTGCCTGTTCGGATAACGGAGGGGTCAAATGCCAGTGTCCCACAGGATTTAAAGGTGATGGTGTCAAAAATTGTGAAGATATTGACGAATGCAGAGAGAAGAAGGCTTGTCAGTGCCCTGAATGTAGCTGCAAGAATACTTGGGGCAGCTATGAGTGCAGTTGTAGTGGAGATCTTTTATATATGAGGGACCACGATACCTGCATAAGTAAAATTGGAAGTCAGGGAAGATCTACTTGGGCTGCTTTCTGGCTGATTATACTTGGCGTAGTTATGATTTCTGGTGGGGCATTCCTAGTGTACAAGTATAGAATAAGGCAATACATGGATTCTGAAATCAGAGCAATCATGGCACAATATATGCCCCTGGACAGCCAAGGAGAAGTTCCAAATCATGTGAATGATGAAAGAGCATGA 1881 0.4487 MKVWRWLLSLFVGLLLPVSIMGRFVVEKNSLRVASPDKIRGTHDSAIGNFGIPQYGGSMAGNVVYPKDNKKGCKEFDESGISFKSSPGALPTIVLLDRGSCFFALKVWNAQKAGASAVLVADDVEEPLITMDTPEEDGSSAKYVENITIPSALVGKSFGEKLKDAISGGDMVNVNLDWRESVPHPDDRVEYELWSNSNDECGVKCDMLMEFVKDFKGAAQILEKGGYTQFTPHYITWYCPHAFTLSKQCKSQCINHGRYCAPDPEQDFSTGYDGKDVVVENLRQLCVFKVANETGKPWVWWDYVTDFQIRCPMKEKKYNKECADAVIKSLGLNIEKIGKCMGDPDADADNPVLKEEQDAQIGKGSRGDVTILPTLVVNNRQYRGKLEKGAVLKAICSGFEETTEPAVCLSTDVETNECLSNNGGCWQDTAANITACKDTFRGRVCECPLVDGVQFKGDGYTSCEARGLGRCKINNGGCWHDARNGHAFSACSDNGGVKCQCPTGFKGDGVKNCEDIDECREKKACQCPECSCKNTWGSYECSCSGDLLYMRDHDTCISKIGSQGRSTWAAFWLIILGVVMISGGAFLVYKYRIRQYMDSEIRAIMAQYMPLDSQGEVPNHVNDERA 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02944 626 Gene3D Laminin 469 519 - -
Viun2g02944 626 PANTHER PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN 2 615 - -
Viun2g02944 626 FunFam Vacuolar-sorting receptor 1 21 185 - -
Viun2g02944 626 CDD PA_VSR 49 176 - -
Viun2g02944 626 SUPERFAMILY PA domain 92 169 IPR046450 -
Viun2g02944 626 Gene3D - 21 185 - -
Viun2g02944 626 FunFam vacuolar-sorting receptor 1 408 464 - -
Viun2g02944 626 Gene3D Laminin 408 464 - -
Viun2g02944 626 SMART egfca_6 515 557 IPR001881 GO:0005509
Viun2g02944 626 Pfam Complement Clr-like EGF-like 498 518 IPR026823 -
Viun2g02944 626 ProSitePatterns EGF-like domain signature 2. 499 513 IPR000742 -
Viun2g02944 626 CDD EGF_CA 515 543 - -
Viun2g02944 626 Pfam PA domain 60 162 IPR003137 -
Viun2g02944 626 ProSitePatterns Calcium-binding EGF-like domain signature. 515 541 IPR018097 GO:0005509
Viun2g02944 626 Gene3D Laminin 520 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02944 Viun-Chr2 33647109 33651321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02944 22 626 Miscellaneous Gene Families AT2G14740 85.289 0.0 1104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02944 - - gmx:100820115 1243.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02944 2 33647109 33651321 Viun2g02944 2 33647109 33651321 ECH
Viun2g02944 2 33647109 33651321 Viun7g03585 7 37126390 37130869 PCT