Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03249 ATGGGAAACCAAAAATTCTCGATATTCTTGATTGGGGCGTCTTTGGTCATCAATACTGCCTGGAAAAATCCCTCTGGTGATTGGCATGTGGGTTACAAATTGGTTTATGAACTCTTTACAGAAAATTTGACTTCTCGTTTGAAGAAAGAAAGAAAGAAAAAATGGGATGAGAAAAACCAGGAGGAAATTGCAAAGGCTGTAAAGCAGCTTACTGATTTTGATAAGGAACACGTCAAGGTGGAGGAAGCTAATCTTAAAAGGGTTCGTGAAGACATTCAGAATAAACTTGATCTTCTGAGGAAGCAGTCTGAGAGTTATGATGATAGAGGGCCTGCCATAGATGCTGTTGTCTGGTATGATGGAGAGGTTTGGAGGGTTGCAATTGACACACAGAGTCTTGAGGATGATCCAGACTGTGGGAAACTTGCTAATTTTGTACCCTTAACTAATTATAGGACTGAGAAGAAGTATGGTATCTTCAGCAAATTAGATGCTTGTACATATGTTGTGAATGTCTATAATAATGGAAATGTCTTAAGCATTGTAACAGATTGCTCCCCTCATGGCACCCATGTTGCTGGTATAGCTGCTGCATTCCACCCAGAGGAACCTTTATTGAATGGAGTTGCACCTGGAGCACAATTAATATCTTGTAAAATTGGGGACTCTCGCTTAGGTTCAATGGAAACTGGAACTGGTCTGACTAGGGCTCTGATAGCTGCGGTGGAGCATAAATGTGATCTTATCAATATGAGTTATGGTGAGCCTACTTCACTGCCAGACTATGGACGGTTCGTTGACCTTGTGAATGAAGCAGTAAACAAGCATAGACTGATATTTGTGAGCAGTGCTGGTAATAGTGGGCCAGCATTGAGCACTGTTGGAGCACCTGGTGGTACATCTTCAAATATTATAGGTGTTGGAGCTTATGTTTCTCCTGCAATGGCAGCTGGTGCTCATTCTGTTGTGGCACCTCCTTCCGATGGACTTGAATACACATGGTCTAGTCGTGGACCAACAACTGATGGAGATCTTGGCATCTCTATAAGTGCTCCTGGTTGTGCAGTTGCTCCTGTTCCTACATGGACTCTTCAACGGCGTATGCTCATGAATGGGACGTCAATGGCATCACCATCAGCCTGTGGTGGAATTGCATTGCTCTTAAGTGCAATGAAGGCTGAGGGGATTCCTGTGAGTCCATATAGTGTGAGGAAGGCCCTTGAAAATACATCTGTTCCCATAGGTGGTTCACCCGAGGAAAAGTTGTCCACTGGGCAAGGGCTTATGCAAGTTGACAAGTGTTATGAATATATAAAGCAGTCTCAAAATATTCCAAATGTTCGATATCAAATTATGGTCCATAAATCTGGAAAAACAAAGCCTTGGTCACGGGGCATCTACTTGAGGGAGGCTAGTGATTGCCAACAACCTATGGAGTGGACTGTGCAAGTTGATCCAAAATTTCATGAAGATGCCAAGAAGCTTGAGGAATTGGCTATGTTTGAGGAGTTCATTGAGTTGCACTCATCAGATCAGACAGTTGTGAAAGCTCCAGAGTATCTACTACTCACTCATAATGGTCGTACCTTCAACATAATTGTAGATCCTACCAATTTAAATGATGGTCTGCATTACTATGAGCTTTATGGTATTGACTACAAAGCACCATGGCGTGGTCCTATTTTCAGAATTCCAGTTACTGTAACTAAGCCCATGGCTGTAACTGACAGACATCCTCTAGTTTCATTTTCAAATATGTTATTCCTGCCAGGCCATGTTGAGAGGAAGTATATAGAAGTGCCAAATGGTGCATCTTGGATTGAAGCAACCATGAACGCATCAAGTTTTGATACAGTTCGAAGATTTTTTGTGCACACAGTTCAGATATGTCCATTGCGAAGACCTTTTGCAAGGAGGAATGTGATAACTTTTTCTTCTCCTGCTGCCAAAAGCTTTACCTTTAGGGTAGTAGGTGGCCAGACATTGGAACTAGTCATAGCTCAGTTCTGGTCAAGTGGCATTGGCAGTCATGAGACCACCAGGGTAGATCTTGAGGTTATGTATCATGGTATAAAAGTCAATCAAGAGGAAATTGTACTTGATGGGAGTGAAGCACCAATCAGAATTGATGCTGAAGCGCTATTGGCATCTGAGAAACTTGCACCAGTAGGAATTCTAAATAAGATAAGGGTCCCCTATCGACCAATAGATGCTACGATTAGCTCACTTTCAAGTGATCGTGACAAACTCCCCTCTGGAAAGCAGATACTAGCTTTGACGTTAACATACAAGATCAAATTGGATGATGGAGCTGAAATAAAACCTCAAATACCGTTTCTAAATGATCGGATATATGATACTAAATTTGAGTCTCAATTTTACATCATTTCCGATTCAAACAAGAAAGTATATTCAAGTGGAGATGCCTATCCGAACTCTACAAAACTTCCCAAGGGAGAATACAATTTACAACTGTATTTAAGGCATGACAATGTGCAGATTTTGGAAAAGATGAAGCAGCTGGTGTTATTCATCCAGCGGAATTTAGAAGAGAAGGAGATCATTCGGTTATGCTTTTTCTCTGAACCTGATGGTCCTGTGATGGGAGATAGTTCCTTCAAGTCCTCAACGTTAGTTCCGGGTATAAAGGAAGGATTTTATCTTGGTCCTCCACCAAAAGACAAACTTCCCAAGAACTGTCTACAAGGATCTGTGTTGGTGGGATCAATATCATATGGTAAACTATCATTTGCTGGTCTACAGGATGGTAAAAGTCCAGAAAAGCATCCTGTGTCACATCGGGTTTCTTATATCATTCCCCCAAATAAGGTTGACGAGGACAAGGGAAAAAGTTCTTCCTTATCTTCCAAAAAGACAGTTTCTGAACGCTTAGAACAAGAGGTACGAGATACAAAACTGAAAGTGTTTGGCGGTCTAAAACAAGGAAGCAATGAAGAGTGCCTTGAATGGAAGGAGTTGTCTGCCTCACTCAAAACTGAATATCCAAAGCACACACCGTTGCTTGCAAAGATTTTAGAAGGTTTAGTTTCCAGAAGTTATATCAAAGACAAAGTTCTTCATCATGAAGAGATAATTGATGCAGCAAATGAGGTTATTGACAGTGTTGATAAAGAAGAGTTAGCAAAATTTTTTGCACTAAAACATGATCCAGAAGATGAGGAAGCAGAGAAAACCAAGAAAGAGATGGACTCAACCCGTGATCAGTTGGCAGAGGCACTTTACCAAAAGGGGCTTGCACTGGCAGAGATTGCGTCTTTGAAGGAGGTAGAAAAGTCCTTAGCTTCGGTTGCTACAGAAGGTGCAAAACAAGATGTGGAGAAAACTGATGAGCAATCCAAGGATGATGACGTTCATCCAGACTTGTTCAAAGAGAACTTCAATGAACTGAAGAAATTGGTTGATGTCAAGTGCAGAAAATATGGAATCCTGTTGGTTACAAACGAGAGGCGTAATCAAAGGCTTGGAACAGCATTGAAGGTACTGAATGACATCATTCAAGATGATGCCGAGCCTGCCCAGAAGAAATTCTATGAACTGAAGCTCTCTTTGCTTGAGGAAATTGGATGGACTCATTTTTGTACATATGAGAGGGAATGGATGCTTGTGCGTTTCCCCCCAAGCTTGCCCCTTTTCTAG 3657 0.4156 MGNQKFSIFLIGASLVINTAWKNPSGDWHVGYKLVYELFTENLTSRLKKERKKKWDEKNQEEIAKAVKQLTDFDKEHVKVEEANLKRVREDIQNKLDLLRKQSESYDDRGPAIDAVVWYDGEVWRVAIDTQSLEDDPDCGKLANFVPLTNYRTEKKYGIFSKLDACTYVVNVYNNGNVLSIVTDCSPHGTHVAGIAAAFHPEEPLLNGVAPGAQLISCKIGDSRLGSMETGTGLTRALIAAVEHKCDLINMSYGEPTSLPDYGRFVDLVNEAVNKHRLIFVSSAGNSGPALSTVGAPGGTSSNIIGVGAYVSPAMAAGAHSVVAPPSDGLEYTWSSRGPTTDGDLGISISAPGCAVAPVPTWTLQRRMLMNGTSMASPSACGGIALLLSAMKAEGIPVSPYSVRKALENTSVPIGGSPEEKLSTGQGLMQVDKCYEYIKQSQNIPNVRYQIMVHKSGKTKPWSRGIYLREASDCQQPMEWTVQVDPKFHEDAKKLEELAMFEEFIELHSSDQTVVKAPEYLLLTHNGRTFNIIVDPTNLNDGLHYYELYGIDYKAPWRGPIFRIPVTVTKPMAVTDRHPLVSFSNMLFLPGHVERKYIEVPNGASWIEATMNASSFDTVRRFFVHTVQICPLRRPFARRNVITFSSPAAKSFTFRVVGGQTLELVIAQFWSSGIGSHETTRVDLEVMYHGIKVNQEEIVLDGSEAPIRIDAEALLASEKLAPVGILNKIRVPYRPIDATISSLSSDRDKLPSGKQILALTLTYKIKLDDGAEIKPQIPFLNDRIYDTKFESQFYIISDSNKKVYSSGDAYPNSTKLPKGEYNLQLYLRHDNVQILEKMKQLVLFIQRNLEEKEIIRLCFFSEPDGPVMGDSSFKSSTLVPGIKEGFYLGPPPKDKLPKNCLQGSVLVGSISYGKLSFAGLQDGKSPEKHPVSHRVSYIIPPNKVDEDKGKSSSLSSKKTVSERLEQEVRDTKLKVFGGLKQGSNEECLEWKELSASLKTEYPKHTPLLAKILEGLVSRSYIKDKVLHHEEIIDAANEVIDSVDKEELAKFFALKHDPEDEEAEKTKKEMDSTRDQLAEALYQKGLALAEIASLKEVEKSLASVATEGAKQDVEKTDEQSKDDDVHPDLFKENFNELKKLVDVKCRKYGILLVTNERRNQRLGTALKVLNDIIQDDAEPAQKKFYELKLSLLEEIGWTHFCTYEREWMLVRFPPSLPLF 1218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03249 1218 MobiDBLite consensus disorder prediction 1105 1125 - -
Viun7g03249 1218 Coils Coil 1062 1082 - -
Viun7g03249 1218 Gene3D - 958 1218 IPR046939 -
Viun7g03249 1218 Pfam Subtilase family 164 427 IPR000209 GO:0006508|GO:0008236
Viun7g03249 1218 MobiDBLite consensus disorder prediction 941 962 - -
Viun7g03249 1218 FunFam Tripeptidyl-peptidase 2 448 579 - -
Viun7g03249 1218 PANTHER PEPTIDASE S8 68 835 - -
Viun7g03249 1218 Pfam Tripeptidyl peptidase II 715 900 IPR022229 -
Viun7g03249 1218 SUPERFAMILY Subtilisin-like 181 449 IPR036852 GO:0004252|GO:0006508
Viun7g03249 1218 Gene3D - 447 582 IPR046940 -
Viun7g03249 1218 FunFam Tripeptidyl-peptidase 2 homolog 112 445 - -
Viun7g03249 1218 ProSitePatterns Serine proteases, subtilase family, serine active site. 372 382 IPR023828 -
Viun7g03249 1218 Gene3D - 8 61 - -
Viun7g03249 1218 ProSitePatterns Serine proteases, subtilase family, histidine active site. 188 198 IPR022398 -
Viun7g03249 1218 MobiDBLite consensus disorder prediction 1109 1125 - -
Viun7g03249 1218 Coils Coil 82 109 - -
Viun7g03249 1218 Gene3D Peptidase S8/S53 domain 113 446 IPR036852 GO:0004252|GO:0006508
Viun7g03249 1218 PRINTS Subtilisin serine protease family (S8) signature 371 387 IPR015500 -
Viun7g03249 1218 PRINTS Subtilisin serine protease family (S8) signature 184 197 IPR015500 -
Viun7g03249 1218 ProSiteProfiles Serine proteases, subtilase domain profile. 82 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03249 Viun-Chr7 34708882 34729077 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03249 K01280 - gmx:100787184 2143.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03249 7 34708882 34729077 Viun7g03249 7 34708882 34729077 ECH
Viun4g02162 4 37099882 37119293 Viun7g03249 7 34708882 34729077 PCT