Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02162 ATGCCGTGCTCTTCATCCATTTCCACCATCACCGGCGATAAAAGCAGCAACAGCAGTAACAAGAATAGAGATGGTTCTTCCTCTCTGCGCGAGTTCAAGCTGAACGAATCCACTTTCCTTGCTTCGCTCATGCCTAAGAAGGAGATTGGCGTCGATCGTTTCCTCGACGCTCATCCCGAGTACGACGGTCGCGGCGCTCTCATCGCCATCTTCGATTCTGGTGTAGACCCAGCTGCTGATGGATTACAGATTACCTCAGATGGGAAGCCAAAAGTTCTCGATGTCATTGATTGCACAGGGAGTGGTGATATTGATACCTCAAAGGTGGTGAAGGCTGATGCTGACGGTCATATTTGTGGGGCTTCAGGGGCATCATTGGTTATCAATACATCATGGAAGAATCCTTCTGGTGAATGGCATGTGGGCTATAAATTGGTTTATGAGCTATTCACGGAAACTTTGACTTCTCGTTTGAAGAAAGAAAGAAAGAAAATATGGGATGAGAAAAACCAGGAGGAAATTGCTAAGACTGTAAAACAACTTGCTGACTTTGATCAGCAACACATCAAGGTAGAGGATGTACGTCTTAAAAGGGCCAGGGAAGATATCCAAAATAGACTTGATATTCTGAGAAAACAATCTGAGAGCTATGATGATAGAGGGCCTGTCATAGACGCCGTTGTCTGGCATGACGGAGAGGTTTGGAGGGTTGCCCTTGACACACAGAGTCTGGAGGATGATCCAAATAGTGGAAAGCTTGTTGATTTTGTGCCTTTAACTAATTATAGAATAGAGAGGAAGTATGGTGTCTTCAGCAAATTAGATGCTTGTACATTTGTTGCTAATGTCTATAATGATGGGAATGTCTTGAGTATCGTAACAGACAGTTCTCCACATGCCACCCATGTTGCTGGTATAGCTACTGCTTTCCACCCAAAGGAGCCCTTGTTGAATGGAGTTGCACCTGGCGCACAAATAATATCTTGTAAAATTGGGGATTCTCGCTTAGGTTCAATGGAAACAGGAACCGGCTTAACTCGCGCACTGATAGCAGCTGTGGAGCATAAGTGTGACCTTATCAACATGAGTTATGGTGAAGGAACATTACTACCAGACTATGGGCGCTTTGTTGACCTTGTGAATGAAGTGGTGAACAAGCATCGTTTGATATTTGTGAGCAGTGCTGGTAACAGTGGACCGGGATTGAGCACCGTTGGTGCACCTGGTGGTACTTCCTCAAGTATCATAGGTGTTGGCGCATATGTATCTCCTGCTATGGCTGCTGGTGCTCATTGTGTTGTTGAGCCTCCTTCTGATGGGCTTGAATACACTTGGTCTAGCAGAGGACCAACAGCTGATGGAGACCTTGGTGTTTGTGTGAGTGCTCCGGGTGGTGCTGTTGCTCCTGTTCCCACATGGACTCTGCAACGGCGTATGCTCATGAATGGGACATCAATGGCATCACCATCAGCCTGTGGAGGAATTGCATTGGTCATAAGTGCAATGAAGGCTGAGGGAATTCCTGTGAGTCCATACAGTGTGAGGATAGCACTTGAAAATACTGCAGTCCCCATAGGTGATCTACCCGAGGATAAATTATCCACTGGACAAGGGCTTATGCAAGTTGACAAGGCTTTTGAATATATACAGAAGTGTCAAAATGTTCCATGTGTTTGGTATCAAATAAAAATCCAGCAATCTGGAAAAAGTAATCCTTCATCAAGGGGCATCTACCTTAGGGAGGCTAGTGCTTGCACTCAATCTACCGAGTGGACAGTGCAAGTTAATCCAAAATTTCATGAAGATGCTGACAACTTAGAGGATTTGGTTCCATTTGAGGAGTACATTGAATTACATTCTACAGAAGAAACAGTTGTGAAGTCCCCCGACTATCTTTTGCTCACTAATAATGGTCGCAGCTTCAATGTATTGGTCGATCCTTCCAATCTTTCGGATGGTCTTCATTATTTTGAGGTCTATGGTATTGACTACAAAGCTCCATGGCGTGGTCCTCTTTTCAGAATTCCAATCACCATAACAAAGCCTAAGGCTGTAACTAACCTGCCTCCACAAATTTCTTTTTCAAAGTTATTATTCCAGCCAGGCCATATAGAAAGAAGATACATCGAAGTGCCGCATGGTGCAACTTGGGCTGAAGCAACAATGAAAACATCAGATTTCGACACAGCAAGAAGATTTTATGTGGATGCTGTTCAGCTGTGCCCACTGCAAAGACCTTTGAAATGGGAGAGTGCTGTAATTTTTCCTTCTCCTGCTGCGAAAAGCTTTGCCTTTAGGGTAGTAAGTGGTCAGACATTGGAACTAGTCATTTCTCAGTTTTGGTCAAGTGGCATAGGAAGTCATGAGTCTGCGAGTGTGGATTTTGAGGTTGTGTTTCACGGGATAAAAGTCAATCAGGATGTTATACTTGATGGTAGTGATGCACCAGTTAGGATTGACACTGAAACACTACTGGTATCTGAGGAACTTGCACCTGTGGCAATTCTGAACAAGATTAGGGTACCATATCGACCAATAGATTCTAAGATTAGTGCACTTTCAACAGATCGTGACAAACTTCCTTCTGGACAGCAGATACTGGCACTGACTTTGACCTACAAGATCAAATTGGAAGATGGAGCTCAAATAAAACCTCACATACCATTGTTAAATGACCGGATATATGACACTAAATTTGAGTCCCAATTTTACATGATTTCTGACTCAAACAAGCGCATATATTCAAGTGGAGATGTCTATCCAAGTTCTTCTAATCTTCCCAAAGGAGAATATACTTTACAGTTATATTTGAGGCATGACAATGTGCAGATTTTGGAAAAGATGAGGCATTTGGTGTTATTCATTGAGCGAAATTTGGAAGAGAAGGATGTAATTCGGTTAAGCTTTTTCTCTCAACCTGATGGCCCCCTGATGGGAAATGGTTCCTTTAAGTCCTCATCACTAGTTCCAGGTATAAAAGAAGGACTGTATATTGGTCCACCACAAAAAGAAAAGCTTCCCAAGAATTCTCCACTCGGATCTGTATTGCTAGGGACAATTTCATATGGGAAGCTATCATTTGCTGGTCAGGGAGAAAATACAAATCCTGAAAAGCACCCTGCTTCGTATACAATTTCTTATATAGTTCCCCCAAATAAGATTGACGAGGACAAGGGAAAAGGTTCTTCCTTATCTTCCAAGAAGAATGTTTCAGAACGCTTAAACGAAGAGGTAAGAGATACTAAAATAAAAGTTCTAGCAAGCTTAAAACAAGAAACTTGTGAAGAGCGCTCGGAGTGGAAAGAGCTATCTGCCTTGCTCAAATCAGAATATCCAAAGTACACTCCATTACTTGCAACCATTTTGGAAGGTCTAGTTTCTAGGAGTAATGTCAAAGACAAAATTAATCATGATGAAGAGGTGATTGGCGCTGCCGATGAGGTGATTGACAGTATTGATAAAGAAGAGCTGGCAAAATTTTTTGCACTAAAAAATGATCCTGAAGAGGAAGAAGCAGAGAATATCCGAAAAAAGATGGAGTTAACCCGAGACCAATTGGCAGAGGCACTATACCAAAAGGGGCTTGCGCTGGCAGAGATTGAGTCTTTAAAGTTGGCAGACTTGACTTGGTGTATATTGTCAAAGGACGGAGATAAGTCCCCAACTTCGGCTGCAACAGAAGGGGCAAAAGGAGGCTTGGACAAAAAACAATCCTCAGATGATCGCAGAGATTTGTTTGAAGAGAATTTTAAAGAACTGAAGAAATGGGTTGATGTGAAGTCACCTAAATATGGAATCCTCTTAGTAACACGAGAGAGGCGAGCTCAAAGACTTGGGACAGCATTGAAGGTACTGTGTGACATAATTCAAGATGATGCAGAGCCTGCCAAAAAGAAATTCTTCGATCTGAAACTTTCTTTGCTTGATGAGATTGGGTGGACACATTTAGCTACATATGAGAGACAGTGGATGCATGTGCGTTTCCCTCCAAGCTTGCCTCTTTTCTAG 4008 0.4279 MPCSSSISTITGDKSSNSSNKNRDGSSSLREFKLNESTFLASLMPKKEIGVDRFLDAHPEYDGRGALIAIFDSGVDPAADGLQITSDGKPKVLDVIDCTGSGDIDTSKVVKADADGHICGASGASLVINTSWKNPSGEWHVGYKLVYELFTETLTSRLKKERKKIWDEKNQEEIAKTVKQLADFDQQHIKVEDVRLKRAREDIQNRLDILRKQSESYDDRGPVIDAVVWHDGEVWRVALDTQSLEDDPNSGKLVDFVPLTNYRIERKYGVFSKLDACTFVANVYNDGNVLSIVTDSSPHATHVAGIATAFHPKEPLLNGVAPGAQIISCKIGDSRLGSMETGTGLTRALIAAVEHKCDLINMSYGEGTLLPDYGRFVDLVNEVVNKHRLIFVSSAGNSGPGLSTVGAPGGTSSSIIGVGAYVSPAMAAGAHCVVEPPSDGLEYTWSSRGPTADGDLGVCVSAPGGAVAPVPTWTLQRRMLMNGTSMASPSACGGIALVISAMKAEGIPVSPYSVRIALENTAVPIGDLPEDKLSTGQGLMQVDKAFEYIQKCQNVPCVWYQIKIQQSGKSNPSSRGIYLREASACTQSTEWTVQVNPKFHEDADNLEDLVPFEEYIELHSTEETVVKSPDYLLLTNNGRSFNVLVDPSNLSDGLHYFEVYGIDYKAPWRGPLFRIPITITKPKAVTNLPPQISFSKLLFQPGHIERRYIEVPHGATWAEATMKTSDFDTARRFYVDAVQLCPLQRPLKWESAVIFPSPAAKSFAFRVVSGQTLELVISQFWSSGIGSHESASVDFEVVFHGIKVNQDVILDGSDAPVRIDTETLLVSEELAPVAILNKIRVPYRPIDSKISALSTDRDKLPSGQQILALTLTYKIKLEDGAQIKPHIPLLNDRIYDTKFESQFYMISDSNKRIYSSGDVYPSSSNLPKGEYTLQLYLRHDNVQILEKMRHLVLFIERNLEEKDVIRLSFFSQPDGPLMGNGSFKSSSLVPGIKEGLYIGPPQKEKLPKNSPLGSVLLGTISYGKLSFAGQGENTNPEKHPASYTISYIVPPNKIDEDKGKGSSLSSKKNVSERLNEEVRDTKIKVLASLKQETCEERSEWKELSALLKSEYPKYTPLLATILEGLVSRSNVKDKINHDEEVIGAADEVIDSIDKEELAKFFALKNDPEEEEAENIRKKMELTRDQLAEALYQKGLALAEIESLKLADLTWCILSKDGDKSPTSAATEGAKGGLDKKQSSDDRRDLFEENFKELKKWVDVKSPKYGILLVTRERRAQRLGTALKVLCDIIQDDAEPAKKKFFDLKLSLLDEIGWTHLATYERQWMHVRFPPSLPLF 1335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02162 1335 Coils Coil 193 220 - -
Viun4g02162 1335 SUPERFAMILY Subtilisin-like 43 556 IPR036852 GO:0004252|GO:0006508
Viun4g02162 1335 ProSitePatterns Serine proteases, subtilase family, serine active site. 483 493 IPR023828 -
Viun4g02162 1335 FunFam Tripeptidyl-peptidase 2 homolog 223 556 - -
Viun4g02162 1335 Pfam Subtilase family 63 526 IPR000209 GO:0006508|GO:0008236
Viun4g02162 1335 Pfam Tripeptidyl peptidase II 825 1009 IPR022229 -
Viun4g02162 1335 Gene3D - 559 690 IPR046940 -
Viun4g02162 1335 ProSiteProfiles Serine proteases, subtilase domain profile. 48 546 - -
Viun4g02162 1335 Gene3D Peptidase S8/S53 domain 223 557 IPR036852 GO:0004252|GO:0006508
Viun4g02162 1335 Coils Coil 1169 1189 - -
Viun4g02162 1335 FunFam Tripeptidyl-peptidase 2 107 168 - -
Viun4g02162 1335 FunFam tripeptidyl-peptidase 2 isoform X1 46 131 - -
Viun4g02162 1335 Gene3D - 1068 1335 IPR046939 -
Viun4g02162 1335 PRINTS Subtilisin serine protease family (S8) signature 63 82 IPR015500 -
Viun4g02162 1335 PRINTS Subtilisin serine protease family (S8) signature 295 308 IPR015500 -
Viun4g02162 1335 PRINTS Subtilisin serine protease family (S8) signature 482 498 IPR015500 -
Viun4g02162 1335 MobiDBLite consensus disorder prediction 1218 1240 - -
Viun4g02162 1335 FunFam Tripeptidyl-peptidase 2 559 690 - -
Viun4g02162 1335 Gene3D - 107 176 - -
Viun4g02162 1335 MobiDBLite consensus disorder prediction 1 28 - -
Viun4g02162 1335 PANTHER PEPTIDASE S8 37 945 - -
Viun4g02162 1335 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 43 525 IPR034051 GO:0006508|GO:0008240
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02162 Viun-Chr4 37099882 37119293 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02162 K01280 - gmx:100798235 2379.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g02162 4 37099882 37119293 Viun4g02162 4 37099882 37119293 ECH
Viun4g02162 4 37099882 37119293 Viun7g03249 7 34708882 34729077 PCT