Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03156 ATGGTGAAGACCAAAATTTCTCTTCTCCTTCCTCTCCTCTTCTTCACTCTCGTCGGAACCTCTCATGCCGGCGGCATAGCCATCTACTGGGGCCAAAACGGCAACGAGGGAACGCTTTCCGAAGCATGTGACACAGGGAGATACACCCACGTCAACATAGCTTTCCTCAACAAATTCGGCAATGGCCAAACCCCAGAAATGAACCTGGCTGGTCACTGCAACCCCGCAACCAATTCCTGCACAAAGTTCAGCGCTCAAATCAAGTACTGCCAAAGCAAAAACATCAAGGTCTTGCTTTCCATAGGTGGTGGCATTGGAACCTACACTTTGGCTTCCGTTGAGGATGCAAGGAACGTTTCAACCTTCCTTTGGAACACTTTCTTGGGAGGCCACTCATCAACAAGACCACTAGGTGATGCTGTGTTAGATGGCATAGATTTCGACATAGAACAAGGCTCAACGCAAAACTATGACCACCTTGCACGTTTCCTCAAGGCGTATAGTAAGAAAGGGAAGAAGAGGGTATACCTAGGTGCTGCCCCTCAGTGTCCAATTCCCGATAGGTTTTTGGGCACTGCCCTAGACACGGGCCTATTTGACTTTGTTTGGGTTCAGTTCTACAACAACCCTCCATGTCAGTACGCTGATGGCAACGTCACCAACCTTCTGAATTCTTGGAAGCGTTGGACTAGTACAGTACCTGCTGGGAAGATATTCCTAGGGTTGCCGGCGGCTCCGGCAGCCGCTGGCAGCGGTTTCGTCCCGGCCGATGTGTTGACCTCTAAAATCCTGCCGGTGATTAAGAAGTCACGAAAATATGGTGGGGTGATGCTGTGGTCAAGATTCTTTGATGTTCAGAACGGGTATAGTGCTTCAATTATTGGCAGCGTGTGA 894 0.4966 MVKTKISLLLPLLFFTLVGTSHAGGIAIYWGQNGNEGTLSEACDTGRYTHVNIAFLNKFGNGQTPEMNLAGHCNPATNSCTKFSAQIKYCQSKNIKVLLSIGGGIGTYTLASVEDARNVSTFLWNTFLGGHSSTRPLGDAVLDGIDFDIEQGSTQNYDHLARFLKAYSKKGKKRVYLGAAPQCPIPDRFLGTALDTGLFDFVWVQFYNNPPCQYADGNVTNLLNSWKRWTSTVPAGKIFLGLPAAPAAAGSGFVPADVLTSKILPVIKKSRKYGGVMLWSRFFDVQNGYSASIIGSV 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03156 297 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 24 297 IPR001223 GO:0005975
Viun7g03156 297 Pfam Glycosyl hydrolases family 18 26 284 IPR001223 GO:0005975
Viun7g03156 297 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 142 150 IPR001579 GO:0004553|GO:0005975
Viun7g03156 297 Gene3D Glycosidases 24 296 - -
Viun7g03156 297 PANTHER ENDOCHITINASE 9 293 - -
Viun7g03156 297 SUPERFAMILY (Trans)glycosidases 21 293 IPR017853 -
Viun7g03156 297 CDD GH18_hevamine_XipI_class_III 24 295 IPR045321 -
Viun7g03156 297 FunFam Acidic endochitinase SE2 24 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03156 Viun-Chr7 34212179 34213312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03156 24 297 Glycoside Hydrolase AT5G24090 67.518 3.87e-145 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03156 K01183 - gmx:100818728 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03156 7 34212179 34213312 Viun7g03156 7 34212179 34213312 ECH
Viun4g01973 4 34927044 34928809 Viun7g03156 7 34212179 34213312 PCT