Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03087 ATGGCTGCAAAGCGCGTGTACCAAGTTTGGAAAGGAAGTAATAAATTCATATGCGGAGGGAGGTTGGTATTTGGGCCTGACGCCAGGTCCCTGTTTGTCACCTTGTTGCTGATTATTGTTCCAGTTATAATCTTTTGTGTATGTGTAGCAAGGCATCTCAGGCATGAATTTTCTTCATATAATTCTGGATATGCTATTTTAGCAGTGGCTATTCTTTTTACTATTCATGTTCTGGTGGTTCTCTTTCTTACTTCCTCCGGTGATCCGGGCATTGTTCCAAGAAATTCTCATCCACCAGAAGAAGAGTTTCGTTACGATTCTTCTGTCTCTGCTGATGTTGGGGGAGCTGGACGGCAAACACCGAGTCTCCAGTTCCCTCGAACCAAAGAAGTTGTAGTCAACGGCATTGCTGTAAGGGTGAAATATTGTGAGACTTGTATGCTGTATCGTCCTCCTCGTTGCTCACACTGCTCCATTTGCAATAACTGTGTTGAGCGTTTTGATCACCATTGCCCCTGGGTGGGCCAGTGCATTGGTCTGAGGAACTATCGTTACTTCTTTATGTTTGTTTCTTCAGCAACTATTCTGTGCATCTATGTGTTTTCCCTCTCAGCTCTTTACATCAAGGTTCTGATGGATAATTATGACGGCACAGTTTGGAAGGCAATGAAAGAATCTCCTGCATCTGTGATACTAATGGCTTACTGTTTCATCTCTCTATGGTTTGTCGGTGGACTAACTGGTTTTCATTTATATCTCATAGGCACAAATCAGACTACCTATGAAAACTTCCGGTACAGAGCTGACAGCAGGATCAATGTTTTTAACCGGGGTTGTTTGAATAATTTTCTGGAAGTGTTTTGCACTAAAGTAAAGCCCTCAAGGAACAATTTCAGGGCATTTGCCAGAGAAGAGGTACCAAGGCCACTGGCTCCGATCATTGCACGGCCTCGTGACCCAGATGATGGCTTGGGAGGAGATCGGCGCCCAAAGGTTGAAGATGATCTTGACATTGGTGAAGACCTATTGAAGATATCACAGCGCAGGAACATTGAAGAACTTGATGAGGAGATTCGTGGCAGAGGGAGCAATGGAGCACCCCACCATACATCTGAACCTGACTCAATTTTGTCCTCAGATCATCGAGCTCCCACCATTCGATCAGATGCTAGGCACTCGAGTTGGGACAGGAGTGGAAACTGGGAAATTGCACAAGAGGTTCTTGCCAATTCAAATGTCACAGAAAGCAGAAACTATGTGACTTCAAAGGAAGTGCGGCAATGA 1284 0.447 MAAKRVYQVWKGSNKFICGGRLVFGPDARSLFVTLLLIIVPVIIFCVCVARHLRHEFSSYNSGYAILAVAILFTIHVLVVLFLTSSGDPGIVPRNSHPPEEEFRYDSSVSADVGGAGRQTPSLQFPRTKEVVVNGIAVRVKYCETCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFMFVSSATILCIYVFSLSALYIKVLMDNYDGTVWKAMKESPASVILMAYCFISLWFVGGLTGFHLYLIGTNQTTYENFRYRADSRINVFNRGCLNNFLEVFCTKVKPSRNNFRAFAREEVPRPLAPIIARPRDPDDGLGGDRRPKVEDDLDIGEDLLKISQRRNIEELDEEIRGRGSNGAPHHTSEPDSILSSDHRAPTIRSDARHSSWDRSGNWEIAQEVLANSNVTESRNYVTSKEVRQ 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03087 427 MobiDBLite consensus disorder prediction 357 398 - -
Viun7g03087 427 Pfam DHHC palmitoyltransferase 141 265 IPR001594 GO:0016409
Viun7g03087 427 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 37 305 - -
Viun7g03087 427 MobiDBLite consensus disorder prediction 368 382 - -
Viun7g03087 427 MobiDBLite consensus disorder prediction 312 333 - -
Viun7g03087 427 ProSiteProfiles DHHC domain profile. 141 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03087 Viun-Chr7 33556400 33560401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03087 65 287 Lipid Metabolism Gene Families AT4G22750 29.185 6.24e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03087 K16675 - gmx:100805189 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g01813 4 32264118 32273205 Viun7g03087 7 33556400 33560401 PCT