Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01813 ATGGCAGCCAAGCGCGTTTATGAAGCATGGAAAGGAAGTAATAAATTCCTATTTGGAGGAAGGTTAATATTTGGACCTGATGCTAGGTCACTGCTTGTTACCTTGCTGCTGATCATTGTTCCAGTTATCGTCTTTTGTGTATTTGTAGGAAGACATCTTCGGCATGAATTTTCTTCATATAATGCAGGATATGCTATTTTGGTGCTGGCAGTTATCTTTAATATTTATGTGTTGATTCTTCTCTTTCTTACTTCCTCACGTGATCCGGGTGTTATTCCAAGGAATTTACATCCACCAGAGGAAGAGTTCCGTTATGACTCTTCAGTTTCAGTTGATATTGGGGGTCGCCAAACTCCAAGCCTTCAGTTCCCTCGAACAAAAGAAGTAATGGTCAATGGCCATCCCGTGAGGGTGAAATATTGTGATACTTGTATGCTCTATCGTCCACCTCGTTGTTCACATTGCTCCATTTGCAACAACTGTGTTGAACGTTTTGATCACCATTGCCCTTGGGTGGGCCAATGTATTGGGCTGAGGAACTACCGTTACTTCTTTCTGTTTGTTTCTTCAGCCACTATTCTATGTATCTATGTGTTTTCCATCTCAGCTTTTTACATCAAGGTTCTGATGGATAATTATCACGGGACAGTTTGGAGGGCAATGAAAGAATCTCCTGCATCAGTTATATTAATGGCATACTGTTTCATCTCTTTGTGGTTTGTTGGTGGACTTACTGGCTTTCATCTGTACCTTATTGGCACAAATCAGACTACCTACGAAAACTTTCGGTATAGAGCCGATAACAGGTTCAATGTTTATAACCGTGGTTGTTTAAACAATTTCTTGGAAGTATTTTGTACAAAAGTGAAGCCCTCAAGGAACAATTTCCGAGCTTTCGTCCAGGAGGAGGTACCAAGGCCACCCCCTCCGATCATTTCCCGGGAATCTGAACCGGATCTGGGAGGAGACCCTCGGTCTAAGGTTGAAGACGATCTGGATATCGGTGAGGACTTGTTAAAGATATCACAGCGCCGGAATATTGAAGAAATTGATGAGGACATCCGGAGTAGAGGGAGTAATGGGCCTCCCCATAATACATCTGAAGTTGATTCAGCTTTGGGTTCAGATCGCCGGGCTCCAACAATTCGATCCGAAGCAAGGCACTCAAGTGAGGGTAGAAGTGAAAGCTGGGAAATTGCCTCTGAGGTCCTTGCCAATTCAAATTTAACTGAAAGTAGAGGCCATGTTGCATCAAAGGAGGTGCGCCAAAAACTTGGTGGTTCTTTCTGA 1290 0.4318 MAAKRVYEAWKGSNKFLFGGRLIFGPDARSLLVTLLLIIVPVIVFCVFVGRHLRHEFSSYNAGYAILVLAVIFNIYVLILLFLTSSRDPGVIPRNLHPPEEEFRYDSSVSVDIGGRQTPSLQFPRTKEVMVNGHPVRVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFLFVSSATILCIYVFSISAFYIKVLMDNYHGTVWRAMKESPASVILMAYCFISLWFVGGLTGFHLYLIGTNQTTYENFRYRADNRFNVYNRGCLNNFLEVFCTKVKPSRNNFRAFVQEEVPRPPPPIISRESEPDLGGDPRSKVEDDLDIGEDLLKISQRRNIEEIDEDIRSRGSNGPPHNTSEVDSALGSDRRAPTIRSEARHSSEGRSESWEIASEVLANSNLTESRGHVASKEVRQKLGGSF 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01813 429 Pfam DHHC palmitoyltransferase 138 263 IPR001594 GO:0016409
Viun4g01813 429 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 37 303 - -
Viun4g01813 429 MobiDBLite consensus disorder prediction 352 429 - -
Viun4g01813 429 MobiDBLite consensus disorder prediction 318 332 - -
Viun4g01813 429 ProSiteProfiles DHHC domain profile. 139 189 - -
Viun4g01813 429 MobiDBLite consensus disorder prediction 306 332 - -
Viun4g01813 429 MobiDBLite consensus disorder prediction 400 414 - -
Viun4g01813 429 MobiDBLite consensus disorder prediction 380 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01813 Viun-Chr4 32264118 32273205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01813 65 285 Lipid Metabolism Gene Families AT4G22750 27.706 1.07e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01813 K16675 - gmx:100818705 810.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g01813 4 32264118 32273205 Viun4g01813 4 32264118 32273205 ECH
Viun4g01813 4 32264118 32273205 Viun7g03087 7 33556400 33560401 PCT