Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02411 ATGAGGCTACACCAACTCATCTTGTTCCTGTTGTTGCTCTTTGTTGCCAAAGCAAACGGTTCTCTACTACCATTCGATCCTCCCAGAGGCATTCTGGCGGAGCTCTTGTCTGATCGATTCCCAGACCCGTTTCATGTGCTGGAACAGATTCCATTCGGGGTTGAGAAAGATGAACAATCGACGGTGATGCCAGCTGCTAGAGTGGACTGGAAGGAGACCCCAGAGGGGCATGAAATAATGGTGGACGTGCCAGGGTTGAAGAGGGAAGAGATAAAGATAGAAGTGGAAGAGAACAGGGTGCTGAGAGTGAGTGGCGAAAGGAAGAGAGAAGAGGAGAAGAAAGGGGATCACTGGCACAGAGTGGAGAGGTCCTATGGCAAGTTCTGGAGGCAGTTCAGGTTGCCACAAAATGTGGACTTGGACAGTGTGAAGGCCAAGCTGGAGAATGGGGTCCTCACTTTGACTCTCAACAAGTTGTCACCAGAAAAGATCAAAGGTCCCAGGGTTGTCACCATTGCAGGGGAGGATCAGGAGCCACCCAAGCTCACCAAAGATGGGGCCAAGCAGGAACTTTGA 576 0.5104 MRLHQLILFLLLLFVAKANGSLLPFDPPRGILAELLSDRFPDPFHVLEQIPFGVEKDEQSTVMPAARVDWKETPEGHEIMVDVPGLKREEIKIEVEENRVLRVSGERKREEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLNKLSPEKIKGPRVVTIAGEDQEPPKLTKDGAKQEL 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02411 191 MobiDBLite consensus disorder prediction 170 191 - -
Viun7g02411 191 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 59 175 IPR002068 -
Viun7g02411 191 CDD ACD_ScHsp26_like 67 158 - -
Viun7g02411 191 FunFam 22.0 kDa heat shock protein 29 172 - -
Viun7g02411 191 Pfam Hsp20/alpha crystallin family 69 172 IPR002068 -
Viun7g02411 191 SUPERFAMILY HSP20-like chaperones 61 169 IPR008978 -
Viun7g02411 191 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 54 170 IPR031107 -
Viun7g02411 191 Gene3D - 31 174 IPR008978 -
Viun7g02411 191 ProSiteProfiles CS domain profile. 63 170 IPR007052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02411 Viun-Chr7 28180723 28181679 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02411 K13993 - gmx:100500319 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g02394 4 39299615 39300857 Viun7g02411 7 28180723 28181679 PCT