Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02394 ATGAGAAAATTAGTACTAGTACCACTGATCTTGCTTGTTCTTGCTGGTTTTCCATCCAAGGCAAAAGGGTTTATGCAACCGTTTACAGATCGTCCTGATGCACTCTTGGCTGACATATTGTCTGATCGTTTACTTGATCCATTTCGTGCGTTAGAGCAAATCCCATTTGGGGTTGGCAAAGATCAGGCTTCCATGGCTGTGTCACCTGCAAGAGTAGATTGGAAGGAGACACCACAGGGACATGTTATAATGATAGATGTGCCAGGGTTGAAGAAAGATGACATAAAGATAGAAGTGGAGGGGGATGCAGAGCTGAAAGTGAGTGGAGAAAGGAAGAAGGAGGAGGAGAAGGAAGGGGATCACTGGCATAGAATGGAGAGATCTTACGGCAAATTCTGGAGGCAGTTCAAGTTACCAGAGAATGTAGATTTTGATTCTCTCAGGGCTAGGTTAGAGAATGGAGTGCTTACTCTCACCATGGCCAAGTTGTCACCTGAAAAGACCAAAGCTTCAAGGGTGGTTAACATTGGAGGGGATGATGAACGCAAGCAAGATATTTGA 561 0.4474 MRKLVLVPLILLVLAGFPSKAKGFMQPFTDRPDALLADILSDRLLDPFRALEQIPFGVGKDQASMAVSPARVDWKETPQGHVIMIDVPGLKKDDIKIEVEGDAELKVSGERKKEEEKEGDHWHRMERSYGKFWRQFKLPENVDFDSLRARLENGVLTLTMAKLSPEKTKASRVVNIGGDDERKQDI 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02394 186 SUPERFAMILY HSP20-like chaperones 62 173 IPR008978 -
Viun4g02394 186 FunFam 22.0 kDa heat shock protein 33 176 - -
Viun4g02394 186 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 61 179 IPR002068 -
Viun4g02394 186 Gene3D - 26 176 IPR008978 -
Viun4g02394 186 CDD ACD_ScHsp26_like 71 162 - -
Viun4g02394 186 ProSiteProfiles CS domain profile. 67 174 IPR007052 -
Viun4g02394 186 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 61 174 IPR031107 -
Viun4g02394 186 Pfam Hsp20/alpha crystallin family 73 176 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02394 Viun-Chr4 39299615 39300857 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02394 K13993 - gmx:547971 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g02394 4 39299615 39300857 Viun4g02394 4 39299615 39300857 ECH
Viun4g02394 4 39299615 39300857 Viun7g02411 7 28180723 28181679 PCT