Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01993 ATGGGATCTTTGGTTGCTGAAACAGCCAAGAAGAAAGCAATGTGGTTGTATCCAAAGGTTTTGGGTTATAATCCTTCTGAAAGATGGGGTCACTCTGCTTGTTTCTCTGGGGGGCTTATGTATGTCTTTGGGGGCTGTTGTGGAGGGCTACATTTCGGAGATGTTCTTTGTTTGGACCTTGTGAAAATGAACTGGAGCAAGCTTGGCACCACGGGTGAAAAGCCAGGTCCTAGAGATAGCCATGGTGCTGTTCTTGTAGGGCATAGAATGATAGTTTTCGGTGGCACCAATGGGATAAAGAAGGTGAATGACACTCATATATTGGACCTTGTTACCAAAGAGTGGATTCGTCCTAAATGTGAAGGGACACCTCCTTCACCAAGGGAAAGTCACACTGCTACTCTAGTTGGAGATGAAAGAGTGGTGATTTTTGGTGGCAGTGGTGAAGGTGACGCAAACTATTTAAACGATTTGCATGTTCTAGACCTTCGAAGCATGAGGTGGAGTTCTCCTCAGGTAAAAGGCGATTTGCCTGTCCCTAGGGACAGTCACAGCACTCTTGCAATCGGGAACAGGCTTTTTGTGTATGGTGGAGACTGTGGTGATCAGTATCAGGGTGATGTTAATGTGCTTGACATGGACACAATGACTTGGTCAAGGTTGAAAATTCAAGGTTCTTCCCCAGGAGTCAGGGCAGGTCATGCTGCTGTGAGCATTGGTTCCAAGGTGTACATCATTGGAGGGGTGGGAGATAAACGTTATTACAATGACATATGGGTGTTTGACATCTGCACCTGTTCCTGGGCTCAGCTTGAAATTCGTGGTCAACCGCCACAGGGGCGATTTTCTCACACAGCTGTTGTGGCAGACATGGATATTGCCATATATGGCGGGTGTGGGGAAGATGAACGTCCGTTGAACGAGTTGCTGGTGTTGCAGCTTGGAGCAGAGCATCCAAATGGACGCTACAACATTTCCATGTGCAAAGTTTTTGGAACTTACTGGAATCAAGAAAAGAGGATCATACCTAGAGGAGGAGCTGATACAAACTCGACAACTCCATTCCCGGAGAACCATATGGAAGCCATAGGAAAATGGGCTAATGAAGTTGTGTTGGATAAAGTACAACCTTGTAACATTGATTCAGGCACTTCACAACAGAAGAGGAAGAGAATTGGTTTGGCAAAGGCGTGGGATGTTGAATCAGAACAAGAAGAACATTCTCTTTCACTGTCCCAGCATTCATCTCCTTCGCAATCTGATCAAGAACAGACCCCAGCTCAGAAAGCAAATGTTTCTAACATGGATTCTCAGAGGTATCAATGGTTCAAACAGATGAATAAAAGTCCAAGCTATTGCCAGCTCGACAATGATTCAAGTAACACAACATTTTTTAAGAATCTCACACAAAGAAGTGTTCATCCCATGAAACATCAACCTAAACAAGAGCAGTATGTTCACATTGATTATGATAGAAAAGTACCTCGACACACTCAACACCTGATTGGTGCTGAAGTTCGGGGAAAAGTTGATGGAGCCTTTGATTCAGGTTTACTCATGACTGCAGTAGTTAATGGAAGAGTTTTCAGAGGAGTATTATTTGCACCAGGTGCTACAGTGTTGTCCACATGTGTTGAACCAAACTGTTGTTTATCACGTTCGTTTCCCTCCACTCAAGCATTTATGAACTCAAATGATGCGAGGGATTCGCACCAAGTAACAGAGTCCTGCCATGGCTCGAGGCAACCTCAAGCATCAGCAATGATGAGAGGCCCTACTTCTGCATCTTTAGCCAAAGAGCATCAAATGAGGAGTGACCTTCAAGGCTTGGTTTTGACTCTTGGAGGGCCTGCAAGTGGTAACCATGCTTCATCCTAG 1878 0.4494 MGSLVAETAKKKAMWLYPKVLGYNPSERWGHSACFSGGLMYVFGGCCGGLHFGDVLCLDLVKMNWSKLGTTGEKPGPRDSHGAVLVGHRMIVFGGTNGIKKVNDTHILDLVTKEWIRPKCEGTPPSPRESHTATLVGDERVVIFGGSGEGDANYLNDLHVLDLRSMRWSSPQVKGDLPVPRDSHSTLAIGNRLFVYGGDCGDQYQGDVNVLDMDTMTWSRLKIQGSSPGVRAGHAAVSIGSKVYIIGGVGDKRYYNDIWVFDICTCSWAQLEIRGQPPQGRFSHTAVVADMDIAIYGGCGEDERPLNELLVLQLGAEHPNGRYNISMCKVFGTYWNQEKRIIPRGGADTNSTTPFPENHMEAIGKWANEVVLDKVQPCNIDSGTSQQKRKRIGLAKAWDVESEQEEHSLSLSQHSSPSQSDQEQTPAQKANVSNMDSQRYQWFKQMNKSPSYCQLDNDSSNTTFFKNLTQRSVHPMKHQPKQEQYVHIDYDRKVPRHTQHLIGAEVRGKVDGAFDSGLLMTAVVNGRVFRGVLFAPGATVLSTCVEPNCCLSRSFPSTQAFMNSNDARDSHQVTESCHGSRQPQASAMMRGPTSASLAKEHQMRSDLQGLVLTLGGPASGNHASS 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01993 625 MobiDBLite consensus disorder prediction 403 434 - -
Viun7g01993 625 Pfam Galactose oxidase, central domain 231 278 - -
Viun7g01993 625 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 14 574 - -
Viun7g01993 625 MobiDBLite consensus disorder prediction 409 434 - -
Viun7g01993 625 SUPERFAMILY Kelch motif 20 222 IPR015915 GO:0005515
Viun7g01993 625 Gene3D - 13 120 IPR015915 GO:0005515
Viun7g01993 625 MobiDBLite consensus disorder prediction 565 595 - -
Viun7g01993 625 Pfam Galactose oxidase, central domain 87 135 - -
Viun7g01993 625 Pfam Galactose oxidase, central domain 139 189 - -
Viun7g01993 625 Pfam Galactose oxidase, central domain 37 85 - -
Viun7g01993 625 Gene3D - 121 369 IPR015915 GO:0005515
Viun7g01993 625 MobiDBLite consensus disorder prediction 565 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01993 Viun-Chr7 24900753 24904614 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01993 15 414 Acyl Lipid Metabolism Gene Families AT3G05420 30.476 1.85e-39 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01993 K20285 - gmx:100787222 1070.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01993 7 24900753 24904614 Viun7g01993 7 24900753 24904614 ECH
Viun1g02977 1 38452846 38457054 Viun7g01993 7 24900753 24904614 PCT