Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02977 ATGTCTTTGGGGGTTGCTGGGGGGCTGCATTTTTGCGATGTTCTCACTCTGGACATCACCAAAATGGTTTGGAGCAAGCTCACTACTACCGGTGAGAAGCCAGGGCCGAGAGATAGCCACAGTGCTGTTCTTGTGGGGCATAAAATGATAGTGTTTGGTGGCTCGAATGGGTTCAAGAAGGTGAATCACATTCACATACTTGATCTTGTTACCAAAGAGTGGTTTCGACCCGAATGTAAAGGGACTCCTCCTTCTCCACGTGAAAGCCATACTGCCACTCTGGTAGGTGATGAAAAGATAGTGATATTTGGTGGTAGTGGAGAAGGCCATGCTAACTATTTAAACGATTTGCACATTCTTGATCTTCGAACCATGACTTGGGCTTCCCCTGAGTTGAAAGGTGATTTTCCGGTCCCCAGAGACAGTCATAGTACCCTTGCAATCGGGAACAAACTTGTTGTGTATGGTGGAGATTCTGGTGATCAGTATCATGGCAATGTTCATATGCTTGATATGGCTACAATGACTTGGTCTAGATTGACGATTCAAGGTTCTCCACCAGGAGTCAGGGCAGGTCATGCTGCAGTTAACATTGGAACAAAGGTATATATCATTGGAGGAGTTGGAGATAAACGTTACTATAACGACGTTTGGATCTTTGATATCTGCAATTTTTCGTGGACTCAACTTGATATACATTTTCAACAGCCACAAGGGCGATTTTCTCATACAGCTGTTGCTGCAGGCATGGATATTGCAATATATGGCGGATGTGGGGAAGATGAACGTCCTCTCAACGAATTGTTAGTGTTGCAGCTTGCAGCAGAGCATCCAAATGGACGTTATTACGTTCCCATGTGCAAACCTATTGGAACTTATTGGAATCACGAAAAGAATATTATCCCAGCAGAAGCGGATACAAACTCGGAAACTATCCTCGTGAGGAATAACGTGGAAGCTTTTGGAAATGGAGCTTATGAAATTTCATCAGAAAAATCGTCACCTCATCACTTTGATTCAGGTACTTCACGACAGAAGAGGAGGAGAATTGCTGCTGCAAAGGTATGGGATGTTGAATCAGAACAAGAAGATAGTTTTCTTTCATTGTCTCTTCATTCTTCTCCATATAAATCCGATCAAGAACAGACCCCAAGTCAAGAAGCAAATACATTATTTCCATCCACTTCCCAACACGAAAATGACTCAAATTATAAGAGAACATTGATGAATGTCCCACTTAAGACTCCACAGGCTCTTCATTTCCTACAACATCAACTAAAACAGGAACAATGTCTTCATGTTAACGAGGATAGAAAAAGAGCTCAACGTCAGGCTGCAGAGCAGAAACCAATGATCCGACCCATTCAACACCTGATTGGTGGCGAAGTTCGGGAGAGAGTTGAAGGACCCTTTGACCCAGTTTCGATATCTCCTACAGCTGTAAATGGAAGGATTTTCCGGGGAGTAATATTTGCACCTGGAGCAGGAGTTGTCTCAAAGGGGGCAAGTTCAGTTCCTTCCTCTCAAGCCTTTTTGGGTACTTTAAGGGCTTCTCAGGAAGCGCCAATTTGTTTGCATGCAGAGCCATACCACGGTTCACGATCAAGGCAAACCCCGGTGGCTTTACCGTTTCCAATCATGGGAGCGACTCCTAGTGTTGTTTCCAAGGAGCATAAAATCAGGAGTGATCTTCAAGGATTGGCTCTAACACTCGGAGGACCAGCTAGTGGAAATCCTCAGGTAAAATATTGA 1752 0.4406 MSLGVAGGLHFCDVLTLDITKMVWSKLTTTGEKPGPRDSHSAVLVGHKMIVFGGSNGFKKVNHIHILDLVTKEWFRPECKGTPPSPRESHTATLVGDEKIVIFGGSGEGHANYLNDLHILDLRTMTWASPELKGDFPVPRDSHSTLAIGNKLVVYGGDSGDQYHGNVHMLDMATMTWSRLTIQGSPPGVRAGHAAVNIGTKVYIIGGVGDKRYYNDVWIFDICNFSWTQLDIHFQQPQGRFSHTAVAAGMDIAIYGGCGEDERPLNELLVLQLAAEHPNGRYYVPMCKPIGTYWNHEKNIIPAEADTNSETILVRNNVEAFGNGAYEISSEKSSPHHFDSGTSRQKRRRIAAAKVWDVESEQEDSFLSLSLHSSPYKSDQEQTPSQEANTLFPSTSQHENDSNYKRTLMNVPLKTPQALHFLQHQLKQEQCLHVNEDRKRAQRQAAEQKPMIRPIQHLIGGEVRERVEGPFDPVSISPTAVNGRIFRGVIFAPGAGVVSKGASSVPSSQAFLGTLRASQEAPICLHAEPYHGSRSRQTPVALPFPIMGATPSVVSKEHKIRSDLQGLALTLGGPASGNPQVKY 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02977 583 MobiDBLite consensus disorder prediction 374 401 - -
Viun1g02977 583 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 12 404 - -
Viun1g02977 583 Gene3D - 3 80 IPR015915 GO:0005515
Viun1g02977 583 Gene3D - 81 316 IPR015915 GO:0005515
Viun1g02977 583 Pfam Galactose oxidase, central domain 98 148 - -
Viun1g02977 583 Pfam Kelch motif 36 81 IPR011498 GO:0005515
Viun1g02977 583 SUPERFAMILY Kelch motif 6 274 IPR015915 GO:0005515
Viun1g02977 583 Pfam Kelch motif 190 230 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02977 Viun-Chr1 38452846 38457054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02977 24 274 Acyl Lipid Metabolism Gene Families AT3G05420 28.517 1.24e-27 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02977 K20285 - gmx:100796366 973.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02977 1 38452846 38457054 Viun1g02977 1 38452846 38457054 ECH
Viun1g02977 1 38452846 38457054 Viun7g01993 7 24900753 24904614 PCT