Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01951 ATGGCCAAGGAAGCTTCTCTGTGCCTCTTGTTTCTCTTCTTTCTCATTATCTCCTGTTCTGGATCTCTGGTGGGTTTTTCCTACCGTGAGAGGGGAGACACTTCAACATCTGCTAAAACCATATCATTCCTCCGGCAAAAGAACGTTTCCATGTCTCAGATTCGAATTTTTGTTACAGATCACAGGATTTTGAGCACTCTCAGCAATTCCATCGTGCCAACTGATTTGTACTTGAACAGAAGTCAAGTTCAAAGTTTAATTACTTCAAAACCCTCCGAACTAAAAGCCCGTCTACTTAACTTTCTCCCACATTCAAACATCAAAAGCATCATTGCTAGCTGTGGCAGTGAGTGCTTAGCACAAAATGAGATGCCTTTGTTCTCACGTGCTTTGAAATCAATTGGTTCAGTTCTCAGAGAGCTTCATATAGGGAGGGAGGTAAAAATCTCAGTAGCATTTCCACTTTCATACTTAGAAAAGTTGAATACATCGCATGAAAATAGTATTCGCAGGATTCTTTCATTTATAAGGGAAATGAAATCCTTTGTCATGGTAGAAGACAGCATTGATGGAGAATTAAGCATGGAGAGTCACTTTGTTCATGCTATAATCAAACGAGCCTCTCTTGCTGCTTCCGTTCTTCCTTGCAAAGATGTTCCTATTGTTTTAACAATGAAGAGCACAGTTGTTCCCACTTCATTGGAATTAGCTCAATTCAGTGAGAGGGTATCCAAATATCTAGAAGCAAAAGCTCATGTTACAAAAAGAATAGCTGCATTATATGCAGAGGTGCATGGAACAGAAGATTTTACAAGTAAAGAACTCAAAAGGGAAGAGGAAGAACTGTTTCCTGTGTCCCGCAGAGAGATGCTAAGTAAATCCCACAAAAGGAGAAGTCTAGATGATACAACCAGTCCAACAAACGTAGTTTTCCCCACAAATCCAGCATCATCCACTCCAATAATCACACCCCCAGATACACCAACCATCATCACAGTTCCTGCTACAAATCCTGTCACAATTTCCCCTTCCAATCCTGCTGGAGTGCCTGTGACAGTTCCTTCTACCACACCTGTGTCTTTTCCTCCCACAAATCCAGCCAATACACCAGTACCAGTGAGCAATCCGGCTACAACAACTCCTATAGGGATACCACCCCCAACAACCAACCCTGTGACTTCTCCACCTTCATCAGGAAATGTTCCTGTCACAACAAATCCCCAACCACAACCACCTCCTGCAAACACTAATGCTCCAGCCATTCAGGGGCAGAGTTGGTGTGTGGCAAAGCAAGGATCTCCTGAAGCTTCTCTTCAAGCAGCACTAGACTATGCTTGTGGAATGGGTGGGTCAGATTGTTCTCAAATTCAGCAAGGTGGGAATTGTTACAGTCCAGTTACATTGCAGAACCATGCCTCTTTTGCCTTCAACAGCTACTATCAAAAGAATCCAGCTCCAACAAGCTGCGACTTTGGAGGCACTGCCACCTTAGTTAACACAAATCCAAGCTCGGGTTCATGCGTTTTCCCATCCTCATCGTCATCAACAACAGCAACTCCAAAGTCATCACCCCCAACACCACCTACACTATCAAGTCCAACACTGCCACCACCAAGTTCAGTAACGCCTACACCATCAATTCCAACAGCACCACCAACAACATCAGTAACAGGCCCATTTGGGTATGGTACCCCACCTTCAGTGTTAAATTCAAGCAACCCCGCGTCAGGTACAATGCCAGATTTTGGGTCTGAAAGCCCTCCGGTTGTAAATACAACATCAGCCTCGCATTCTATGAGTTTGAGACCTTCTGTTGGCTGCATTCTTCTGATGGTATCATTAGTCACCATGAGACTTGGTGTGCATCCATAG 1872 0.4396 MAKEASLCLLFLFFLIISCSGSLVGFSYRERGDTSTSAKTISFLRQKNVSMSQIRIFVTDHRILSTLSNSIVPTDLYLNRSQVQSLITSKPSELKARLLNFLPHSNIKSIIASCGSECLAQNEMPLFSRALKSIGSVLRELHIGREVKISVAFPLSYLEKLNTSHENSIRRILSFIREMKSFVMVEDSIDGELSMESHFVHAIIKRASLAASVLPCKDVPIVLTMKSTVVPTSLELAQFSERVSKYLEAKAHVTKRIAALYAEVHGTEDFTSKELKREEEELFPVSRREMLSKSHKRRSLDDTTSPTNVVFPTNPASSTPIITPPDTPTIITVPATNPVTISPSNPAGVPVTVPSTTPVSFPPTNPANTPVPVSNPATTTPIGIPPPTTNPVTSPPSSGNVPVTTNPQPQPPPANTNAPAIQGQSWCVAKQGSPEASLQAALDYACGMGGSDCSQIQQGGNCYSPVTLQNHASFAFNSYYQKNPAPTSCDFGGTATLVNTNPSSGSCVFPSSSSSTTATPKSSPPTPPTLSSPTLPPPSSVTPTPSIPTAPPTTSVTGPFGYGTPPSVLNSSNPASGTMPDFGSESPPVVNTTSASHSMSLRPSVGCILLMVSLVTMRLGVHP 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01951 623 MobiDBLite consensus disorder prediction 553 597 - -
Viun7g01951 623 MobiDBLite consensus disorder prediction 303 317 - -
Viun7g01951 623 MobiDBLite consensus disorder prediction 379 393 - -
Viun7g01951 623 SMART X8_cls 425 509 IPR012946 -
Viun7g01951 623 FunFam Glucan endo-1,3-beta-glucosidase 4 420 513 - -
Viun7g01951 623 PRINTS Proline rich extensin signature 313 325 - -
Viun7g01951 623 PRINTS Proline rich extensin signature 373 390 - -
Viun7g01951 623 PRINTS Proline rich extensin signature 391 416 - -
Viun7g01951 623 PRINTS Proline rich extensin signature 356 372 - -
Viun7g01951 623 PRINTS Proline rich extensin signature 334 355 - -
Viun7g01951 623 MobiDBLite consensus disorder prediction 358 420 - -
Viun7g01951 623 MobiDBLite consensus disorder prediction 289 325 - -
Viun7g01951 623 Gene3D Glycosidases 24 188 - -
Viun7g01951 623 MobiDBLite consensus disorder prediction 503 520 - -
Viun7g01951 623 Gene3D - 420 521 - -
Viun7g01951 623 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Viun7g01951 623 MobiDBLite consensus disorder prediction 503 597 - -
Viun7g01951 623 Pfam X8 domain 426 496 IPR012946 -
Viun7g01951 623 MobiDBLite consensus disorder prediction 521 552 - -
Viun7g01951 623 PANTHER BETA-1,3 GLUCANASE 421 517 IPR044788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01951 Viun-Chr7 24654587 24657771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01951 386 512 Glycoside Hydrolase AT2G05790 48.837 1.49e-31 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01951 - - gmx:100794910 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01951 7 24654587 24657771 Viun7g01951 7 24654587 24657771 ECH
Viun1g02948 1 38256808 38259636 Viun7g01951 7 24654587 24657771 PCT