Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02948 ATGGCCAAGGAATCCTCTCTATGCCTCTTCTTCCTCTCTTTTCTCATTCTCCTTTCTTCCGGGACTGCATCTTCACCCTCTCTTGAAGTACAGAATACCAAAGGTTTAGGTTTTGTACTGGAAGATCTCAAAAGAGAAGAGGGAGAAGGGATAATCCCTTTGATCCTAAGAGAAAAGCCAAGCAAAGTCCACATCAGAAGAATTCTTCAAGTCACAAACAACTCACCTACCACAGTTTCCCCCACAAATCCAACCCCACCTGCACCAGTAATCTCACCTCCAGATACACCAACCATCATCACAGTTCCTTCCACCAATCCTGTGACAGTTTCCCCCACTAATCCAGGGGCAACACCTGTGACAGTTCCTTCTACCACACCAGCTACTCCCTCAGCACCCACAAACCCAGCCAATCCAGGGGCTCAATCAGTCACCAACCCTGCGACCTCATATCCACCACCATCAGGAAATGGTCCTGTCACAAATGCCCTTCCTCCTCCTCCAAACACAAACGCTCAAGCCACGCCTGGGGGCAGTTGGTGTGTGGCAAAGACTGGAGTTTCAGAAGCTACTCTTCAATCAGCATTGGACTATGCTTGTGGAATGCAAAGTGTAGATTGTTCTCAGATACAGCAAGGTGGGAGTTGTTACAATCCAAATTCATTGCAAAACCATGCTTCTTTTGCCTTCAACAGCTACTACCAGAAGAATCCTGCGTCAACAAGCTGTGATTTTGGAGGCACTGCAACCATAGTTAGCACCAATCCAAGTTCGGGTTCTTGCATTTACCCATCTTCTTCAGGGGCAGGCACATCCGGCTCTAATGGCTCACCTTCAGTTTTAGGATCCCAAAGCCCTCCTGATTTAAGTACCTCAAATTCAGCTGGTCTGAGGCCTTCTCTTAACTTTATGGTTCTGATCGTATTATCCTTAGTCGGCATAAGACTCACTATATGA 957 0.4702 MAKESSLCLFFLSFLILLSSGTASSPSLEVQNTKGLGFVLEDLKREEGEGIIPLILREKPSKVHIRRILQVTNNSPTTVSPTNPTPPAPVISPPDTPTIITVPSTNPVTVSPTNPGATPVTVPSTTPATPSAPTNPANPGAQSVTNPATSYPPPSGNGPVTNALPPPPNTNAQATPGGSWCVAKTGVSEATLQSALDYACGMQSVDCSQIQQGGSCYNPNSLQNHASFAFNSYYQKNPASTSCDFGGTATIVSTNPSSGSCIYPSSSGAGTSGSNGSPSVLGSQSPPDLSTSNSAGLRPSLNFMVLIVLSLVGIRLTI 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02948 318 MobiDBLite consensus disorder prediction 269 293 - -
Viun1g02948 318 MobiDBLite consensus disorder prediction 152 172 - -
Viun1g02948 318 PANTHER BETA-1,3 GLUCANASE 79 274 IPR044788 -
Viun1g02948 318 SMART X8_cls 179 263 IPR012946 -
Viun1g02948 318 Gene3D - 176 270 - -
Viun1g02948 318 Pfam X8 domain 180 250 IPR012946 -
Viun1g02948 318 MobiDBLite consensus disorder prediction 105 128 - -
Viun1g02948 318 MobiDBLite consensus disorder prediction 105 175 - -
Viun1g02948 318 FunFam Glucan endo-1,3-beta-glucosidase 4 174 267 - -
Viun1g02948 318 MobiDBLite consensus disorder prediction 135 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02948 Viun-Chr1 38256808 38259636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02948 101 265 Glycoside Hydrolase AT4G26830 38.503 2.06e-27 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02948 - - vun:114194324 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02948 1 38256808 38259636 Viun1g02948 1 38256808 38259636 ECH
Viun1g02948 1 38256808 38259636 Viun7g01951 7 24654587 24657771 PCT